DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRPSLFVLS
Uniprot ID:
Q8N3V7
Source protein:
Synaptopodin
Source gene:
SYNPO
Class:
DEG_APCC_DBOX_1
Location:
811:819
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9923
ASA_SCORE:
74.8778
COIL:
0.6687
CONS_SCORE:
0.7664
DSS_SCORE:
0.4446
HELIX:
0.2863
FCONS_SCORE:
1.0296
RIG_SCORE:
0.7672
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P801S
TCGA-A5-A0GH
UCEC
TCGA
LRPSLFVLS
DEG_APCC_DBOX_1
0.0556
p.P801S
DO43634
UCEC
ICGC
LRPSLFVLS
DEG_APCC_DBOX_1
0.0556
p.R812C
TCGA-BR-4257
STAD
TCGA
LRPSLFVLS
DEG_APCC_DBOX_1
0.8301
p.R812C
DO222817
BTCA
ICGC
LRPSLFVLS
DEG_APCC_DBOX_1
0.8301
p.R812C
DO38683
STAD
ICGC
LRPSLFVLS
DEG_APCC_DBOX_1
0.8301
p.P807S
TCGA-EO-A22R
UCEC
TCGA
LRPSLFVLS
DEG_APCC_DBOX_1
0.2222
p.P807S
DO42713
UCEC
ICGC
LRPSLFVLS
DEG_APCC_DBOX_1
0.2222
p.I821L
TCGA-GV-A3QI
BLCA
TCGA
LRPSLFVLS
DEG_APCC_DBOX_1
0.2778
p.P820H
DO227709
COCA
ICGC
LRPSLFVLS
DEG_APCC_DBOX_1
0.3056
p.A825V
SIDM00654
Small Cell Lung Carcinoma
GDSC
LRPSLFVLS
DEG_APCC_DBOX_1
0.1667
p.A825V
SIDM01525
Acute Myeloid Leukemia
GDSC
LRPSLFVLS
DEG_APCC_DBOX_1
0.1667
p.A818T
SIDM00488
Colorectal Carcinoma
GDSC
LRPSLFVLS
DEG_APCC_DBOX_1
0.7139
Drug responses associated with SYNPO mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRPSLFVLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N3V7
Synaptopodin
DEG_APCC_DBOX_1
811:819
LRPSLFVLS
APC,CDC20,FZR1
0.9923
More...