DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRPYFE
Uniprot ID:
Q86VP3
Source protein:
Phosphofurin acidic cluster sorting protein 2
Source gene:
PACS2
Class:
LIG_APCC_ABBA_1
Location:
319:324
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9847
ASA_SCORE:
89.1833
COIL:
0.7897
CONS_SCORE:
0.653
DSS_SCORE:
0.6136
HELIX:
0.1043
FCONS_SCORE:
1.294
RIG_SCORE:
0.6925
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D309N
TCGA-B5-A0JY
UCEC
TCGA
LRPYFE
LIG_APCC_ABBA_1
0.0556
p.P317R
TCGA-BP-5168
KIRC
TCGA
LRPYFE
LIG_APCC_ABBA_1
0.2778
p.V311I
TCGA-BR-8078
STAD
TCGA
LRPYFE
LIG_APCC_ABBA_1
0.1111
p.R320L
TCGA-DZ-6133
KIRP
TCGA
LRPYFE
LIG_APCC_ABBA_1
0.7316
p.E325K
DO48978
CESC
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.3056
p.V318M
DO227563
COCA
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.3056
p.V318M
DO232761
PBCA
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.3056
p.K315T
DO233814
GACA
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.2222
p.A321S
DO229045
LICA
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.7588
p.A311T
DO29940
OV
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.1111
p.E322K
DO220056
SARC
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.7022
p.R328W
DO220258
SARC
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.2222
p.P320R
DO37414
SKCM
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.7512
p.P320L
DO37936
SKCM
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.7582
p.P324S
DO229221
THCA
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.6752
p.K332N
DO223286
UCEC
ICGC
LRPYFE
LIG_APCC_ABBA_1
0.1111
p.G325C
SIDM02021
Esophageal Carcinoma
GDSC
LRPYFE
LIG_APCC_ABBA_1
0.3056
p.S327W
SIDM00661
B-Cell Non-Hodgkin's Lymphoma
GDSC
LRPYFE
LIG_APCC_ABBA_1
0.25
p.S327W
ACH-000914
Lymphoma
CCLE
LRPYFE
LIG_APCC_ABBA_1
0.25
p.S327W
HT
haematopoietic_and_lymphoid_tissue
COSMIC
LRPYFE
LIG_APCC_ABBA_1
0.25
p.T314P
ACH-000922
Leukemia
CCLE
LRPYFE
LIG_APCC_ABBA_1
0.1944
p.L312H
ACH-001513
Cervical Cancer
CCLE
LRPYFE
LIG_APCC_ABBA_1
0.1389
p.E319K
BT-474
breast
COSMIC
LRPYFE
LIG_APCC_ABBA_1
0.7022
p.K315N
MFE-319
endometrium
COSMIC
LRPYFE
LIG_APCC_ABBA_1
0.2222
Drug responses associated with PACS2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRPYFE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86VP3
Phosphofurin acidic cluster sorting protein 2
LIG_APCC_ABBA_1
319:324
LRPYFE
APC,CDC20,FZR1
0.9847
More...