DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRQELMQVH
Uniprot ID:
Q08378
Source protein:
Golgin subfamily A member 3
Source gene:
GOLGA3
Class:
DEG_APCC_DBOX_1
Location:
883:891
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7733
ASA_SCORE:
106.4
COIL:
0.0313
CONS_SCORE:
0.7083
DSS_SCORE:
0.4492
HELIX:
0.9679
FCONS_SCORE:
0.995
RIG_SCORE:
0.7523
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L880M
TCGA-19-2621
GBM
TCGA
LRQELMQVH
DEG_APCC_DBOX_1
0.25
p.L880M
DO11100
GBM
ICGC
LRQELMQVH
DEG_APCC_DBOX_1
0.25
p.G892V
TCGA-58-A46M
LUSC
TCGA
LRQELMQVH
DEG_APCC_DBOX_1
0.3056
p.G892V
DO45485
LUSC
ICGC
LRQELMQVH
DEG_APCC_DBOX_1
0.3056
p.R884W
TCGA-BG-A3EW
UCEC
TCGA
LRQELMQVH
DEG_APCC_DBOX_1
0.8634
p.R884W
DO48172
UCEC
ICGC
LRQELMQVH
DEG_APCC_DBOX_1
0.8634
p.E893Q
TCGA-L5-A8NK
ESCA
TCGA
LRQELMQVH
DEG_APCC_DBOX_1
0.2778
p.R873S
TCGA-L5-A8NK
ESCA
TCGA
LRQELMQVH
DEG_APCC_DBOX_1
0.0556
p.A899V
TCGA-VQ-A8E3
STAD
TCGA
LRQELMQVH
DEG_APCC_DBOX_1
0.1111
p.A899V
DO51759
STAD
ICGC
LRQELMQVH
DEG_APCC_DBOX_1
0.1111
p.S878L
DO228935
COCA
ICGC
LRQELMQVH
DEG_APCC_DBOX_1
0.6389
p.S878L
DO222477
ESCA
ICGC
LRQELMQVH
DEG_APCC_DBOX_1
0.6389
p.S878L
SIDM00251
Gastric Carcinoma
GDSC
LRQELMQVH
DEG_APCC_DBOX_1
0.6389
p.S878L
ACH-000949
Gastric Cancer
CCLE
LRQELMQVH
DEG_APCC_DBOX_1
0.6389
p.S878L
TGBC11TKB
stomach
COSMIC
LRQELMQVH
DEG_APCC_DBOX_1
0.6389
p.R895W
DO234285
ESAD
ICGC
LRQELMQVH
DEG_APCC_DBOX_1
0.2222
p.G892R
DO233670
GACA
ICGC
LRQELMQVH
DEG_APCC_DBOX_1
0.3056
p.R895Q
SIDM00074
Burkitt's Lymphoma
GDSC
LRQELMQVH
DEG_APCC_DBOX_1
0.2222
p.R895Q
ACH-000402
Lymphoma
CCLE
LRQELMQVH
DEG_APCC_DBOX_1
0.2222
p.R895Q
BL-70
haematopoietic_and_lymphoid_tissue
COSMIC
LRQELMQVH
DEG_APCC_DBOX_1
0.2222
p.H891R
SIDM00683
Prostate Carcinoma
GDSC
LRQELMQVH
DEG_APCC_DBOX_1
0.7133
p.H891R
ACH-000977
lymph_node
CCLE
LRQELMQVH
DEG_APCC_DBOX_1
0.7133
p.H891R
LNCaP-Clone-FGC
prostate
COSMIC
LRQELMQVH
DEG_APCC_DBOX_1
0.7133
p.K874R
SIDM01007
T-Lymphoblastic Leukemia
GDSC
LRQELMQVH
DEG_APCC_DBOX_1
0.1944
p.K874R
ACH-002256
Leukemia
CCLE
LRQELMQVH
DEG_APCC_DBOX_1
0.1944
p.K874R
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
LRQELMQVH
DEG_APCC_DBOX_1
0.1944
p.K881N
SIDM00151
Ovarian Carcinoma
GDSC
LRQELMQVH
DEG_APCC_DBOX_1
0.2778
p.K881N
ACH-000966
Ovarian Cancer
CCLE
LRQELMQVH
DEG_APCC_DBOX_1
0.2778
p.K881N
IGROV-1
ovary
COSMIC
LRQELMQVH
DEG_APCC_DBOX_1
0.2778
Drug responses associated with GOLGA3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRQELMQVH
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q08378
Golgin subfamily A member 3
DEG_APCC_DBOX_1
883:891
LRQELMQVH
APC,CDC20,FZR1
0.7733
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