DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LRQGLARLG
Uniprot ID:
Q9BV35
Source protein:
Calcium-binding mitochondrial carrier protein SCaMC-3
Source gene:
SLC25A23
Class:
DEG_APCC_DBOX_1
Location:
34:42
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5654
ASA_SCORE:
57.9333
COIL:
0.2343
CONS_SCORE:
0.3153
DSS_SCORE:
0.5992
HELIX:
0.7672
FCONS_SCORE:
1.087
RIG_SCORE:
0.7009
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R35C
TCGA-61-2008
OV
TCGA
LRQGLARLG
DEG_APCC_DBOX_1
0.8301
p.R35C
DO29658
OV
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.8301
p.R28C
TCGA-EE-A3J8
SKCM
TCGA
LRQGLARLG
DEG_APCC_DBOX_1
0.1667
p.R28C
DO47276
SKCM
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.1667
p.Q51K
TCGA-FS-A1Z4
SKCM
TCGA
LRQGLARLG
DEG_APCC_DBOX_1
0.0833
p.Q51K
DO37462
SKCM
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.0833
p.G27D
TCGA-G4-6588
COAD
TCGA
LRQGLARLG
DEG_APCC_DBOX_1
0.1389
p.G27D
DO10140
COAD
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.1389
p.Q36H
DO228483
BRCA
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.647
p.Q31K
DO229026
LICA
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.25
p.L43F
DO222413
MELA
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.3056
p.L43F
DO41235
UCEC
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.3056
p.P48S
DO222638
MELA
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.1667
p.A34D
DO51407
PRAD
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.7793
p.I42S
DO37679
SKCM
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.7341
p.R25C
DO37519
SKCM
ICGC
LRQGLARLG
DEG_APCC_DBOX_1
0.1944
p.L41V
SIDM00831
Head and Neck Carcinoma
GDSC
LRQGLARLG
DEG_APCC_DBOX_1
0.5654
p.L41V
ACH-000207
Head and Neck Cancer
CCLE
LRQGLARLG
DEG_APCC_DBOX_1
0.5654
p.L41V
Detroit562
upper_aerodigestive_tract
COSMIC
LRQGLARLG
DEG_APCC_DBOX_1
0.5654
Drug responses associated with SLC25A23 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRQGLARLG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BV35
Calcium-binding mitochondrial carrier protein SCaMC-3
DEG_APCC_DBOX_1
34:42
LRQGLARLG
APC,CDC20,FZR1
0.5654
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