DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRQLLELVD
Uniprot ID:
Q1X8D7
Source protein:
Leucine-rich repeat-containing protein 36
Source gene:
LRRC36
Class:
DEG_APCC_DBOX_1
Location:
529:537
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5843
ASA_SCORE:
50.2222
COIL:
0.0247
CONS_SCORE:
0.5564
DSS_SCORE:
0.1644
HELIX:
0.975
FCONS_SCORE:
1.2555
RIG_SCORE:
0.8761
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S545C
TCGA-66-2785
LUSC
TCGA
LRQLLELVD
DEG_APCC_DBOX_1
0.1111
p.A520V
TCGA-AB-2826
LAML
TCGA
LRQLLELVD
DEG_APCC_DBOX_1
0.0833
p.L546I
TCGA-VQ-A8E3
STAD
TCGA
LRQLLELVD
DEG_APCC_DBOX_1
0.0833
p.M534I
DO31769
OV
ICGC
LRQLLELVD
DEG_APCC_DBOX_1
0.7618
p.G542C
SIDM00127
Oral Cavity Carcinoma
GDSC
LRQLLELVD
DEG_APCC_DBOX_1
0.1944
p.G542C
ACH-002250
Head and Neck Cancer
CCLE
LRQLLELVD
DEG_APCC_DBOX_1
0.1944
p.G542C
JHU-022
upper_aerodigestive_tract
COSMIC
LRQLLELVD
DEG_APCC_DBOX_1
0.1944
p.C538S
MDA-MB-453
breast
COSMIC
LRQLLELVD
DEG_APCC_DBOX_1
0.3056
Drug responses associated with LRRC36 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRQLLELVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q1X8D7
Leucine-rich repeat-containing protein 36
DEG_APCC_DBOX_1
529:537
LRQLLELVD
APC,CDC20,FZR1
0.5843
More...