DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRQRLAPLA
Uniprot ID:
P06727
Source protein:
Apolipoprotein A-IV
Source gene:
APOA4
Class:
DEG_APCC_DBOX_1
Location:
263:271
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7038
ASA_SCORE:
60.3556
COIL:
0.0623
CONS_SCORE:
0.8525
DSS_SCORE:
0.3997
HELIX:
0.9386
FCONS_SCORE:
1.0381
RIG_SCORE:
0.7651
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A271D
TCGA-44-8120
LUAD
TCGA
LRQRLAPLA
DEG_APCC_DBOX_1
0.6682
p.A271D
DO45402
LUAD
ICGC
LRQRLAPLA
DEG_APCC_DBOX_1
0.6682
p.A258T
TCGA-AX-A2HC
UCEC
TCGA
LRQRLAPLA
DEG_APCC_DBOX_1
0.1944
p.A258T
DO41572
UCEC
ICGC
LRQRLAPLA
DEG_APCC_DBOX_1
0.1944
p.L278P
TCGA-AZ-6601
COAD
TCGA
LRQRLAPLA
DEG_APCC_DBOX_1
0.1389
p.L278P
DO8119
COAD
ICGC
LRQRLAPLA
DEG_APCC_DBOX_1
0.1389
p.A258G
TCGA-ZP-A9CZ
LIHC
TCGA
LRQRLAPLA
DEG_APCC_DBOX_1
0.1944
p.A258G
DO52330
LIHC
ICGC
LRQRLAPLA
DEG_APCC_DBOX_1
0.1944
p.R264L
DO225081
BRCA
ICGC
LRQRLAPLA
DEG_APCC_DBOX_1
0.8428
p.R264L
DO52559
BRCA
ICGC
LRQRLAPLA
DEG_APCC_DBOX_1
0.8428
p.E272K
DO229177
LMS
ICGC
LRQRLAPLA
DEG_APCC_DBOX_1
0.3056
p.R275C
DO33091
PACA
ICGC
LRQRLAPLA
DEG_APCC_DBOX_1
0.2222
p.A254T
DO232899
PEME
ICGC
LRQRLAPLA
DEG_APCC_DBOX_1
0.0833
p.K253N
SIDM00583
Pancreatic Carcinoma
GDSC
LRQRLAPLA
DEG_APCC_DBOX_1
0.1667
p.K253N
ACH-001107
Pancreatic Cancer
CCLE
LRQRLAPLA
DEG_APCC_DBOX_1
0.1667
p.K253N
KP-1N
pancreas
COSMIC
LRQRLAPLA
DEG_APCC_DBOX_1
0.1667
p.R264W
SIDM00070
B-Cell Non-Hodgkin's Lymphoma
GDSC
LRQRLAPLA
DEG_APCC_DBOX_1
0.8634
p.R264W
CRO-AP3
NS
COSMIC
LRQRLAPLA
DEG_APCC_DBOX_1
0.8634
p.G280V
SIDM00685
Glioblastoma
GDSC
LRQRLAPLA
DEG_APCC_DBOX_1
0.0833
p.G280V
ACH-000819
Brain Cancer
CCLE
LRQRLAPLA
DEG_APCC_DBOX_1
0.0833
p.G280V
LN-18
central_nervous_system
COSMIC
LRQRLAPLA
DEG_APCC_DBOX_1
0.0833
Drug responses associated with APOA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRQRLAPLA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P06727
Apolipoprotein A-IV
DEG_APCC_DBOX_1
263:271
LRQRLAPLA
APC,CDC20,FZR1
0.7038
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