DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRQRLHGVE
Uniprot ID:
Q96QT4
Source protein:
Transient receptor potential cation channel subfamily M member 7
Source gene:
TRPM7
Class:
DEG_APCC_DBOX_1
Location:
1365:1373
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8551
ASA_SCORE:
88.9778
COIL:
0.4827
CONS_SCORE:
0.2824
DSS_SCORE:
0.3658
HELIX:
0.462
FCONS_SCORE:
1.016
RIG_SCORE:
0.7844
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1366Q
TCGA-AP-A1DV
UCEC
TCGA
LRQRLHGVE
DEG_APCC_DBOX_1
0.7329
p.R1366Q
TCGA-EI-6917
READ
TCGA
LRQRLHGVE
DEG_APCC_DBOX_1
0.7329
p.R1366Q
DO36881
READ
ICGC
LRQRLHGVE
DEG_APCC_DBOX_1
0.7329
p.R1366Q
DO43186
UCEC
ICGC
LRQRLHGVE
DEG_APCC_DBOX_1
0.7329
p.Q1367H
TCGA-B5-A11E
UCEC
TCGA
LRQRLHGVE
DEG_APCC_DBOX_1
0.647
p.Q1367H
DO41644
UCEC
ICGC
LRQRLHGVE
DEG_APCC_DBOX_1
0.647
p.P1357S
TCGA-BF-A5ER
SKCM
TCGA
LRQRLHGVE
DEG_APCC_DBOX_1
0.1111
p.P1357S
DO219454
SKCM
ICGC
LRQRLHGVE
DEG_APCC_DBOX_1
0.1111
p.E1373Q
DO222437
ESCA
ICGC
LRQRLHGVE
DEG_APCC_DBOX_1
0.5633
p.P1362S
SIDM00197
Ewing's Sarcoma
GDSC
LRQRLHGVE
DEG_APCC_DBOX_1
0.25
p.P1362S
SIDM00658
Non-Small Cell Lung Carcinoma
GDSC
LRQRLHGVE
DEG_APCC_DBOX_1
0.25
p.P1362S
SIDM01363
Squamous Cell Lung Carcinoma
GDSC
LRQRLHGVE
DEG_APCC_DBOX_1
0.25
p.G1371E
SIDM00225
Melanoma
GDSC
LRQRLHGVE
DEG_APCC_DBOX_1
0.6087
p.G1371E
ACH-002143
Skin Cancer
CCLE
LRQRLHGVE
DEG_APCC_DBOX_1
0.6087
p.G1371E
IST-MEL1
skin
COSMIC
LRQRLHGVE
DEG_APCC_DBOX_1
0.6087
Drug responses associated with TRPM7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRQRLHGVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96QT4
Transient receptor potential cation channel subfamily M member 7
DEG_APCC_DBOX_1
1365:1373
LRQRLHGVE
APC,CDC20,FZR1
0.8551
More...