DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRQRLMNVQ
Uniprot ID:
Q96M11
Source protein:
Hydrolethalus syndrome protein 1
Source gene:
HYLS1
Class:
DEG_APCC_DBOX_1
Location:
131:139
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9507
ASA_SCORE:
95.1889
COIL:
0.3743
CONS_SCORE:
0.3718
DSS_SCORE:
0.3985
HELIX:
0.5973
FCONS_SCORE:
1.319
RIG_SCORE:
0.836
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S146Y
TCGA-A5-A0G2
UCEC
TCGA
LRQRLMNVQ
DEG_APCC_DBOX_1
0.1389
p.S146Y
DO41235
UCEC
ICGC
LRQRLMNVQ
DEG_APCC_DBOX_1
0.1389
p.D130E
TCGA-BR-8680
STAD
TCGA
LRQRLMNVQ
DEG_APCC_DBOX_1
0.3056
p.D130E
DO47769
STAD
ICGC
LRQRLMNVQ
DEG_APCC_DBOX_1
0.3056
p.G121C
TCGA-D3-A3C8
SKCM
TCGA
LRQRLMNVQ
DEG_APCC_DBOX_1
0.0556
p.G121C
DO47636
SKCM
ICGC
LRQRLMNVQ
DEG_APCC_DBOX_1
0.0556
p.L128I
TCGA-EO-A22U
UCEC
TCGA
LRQRLMNVQ
DEG_APCC_DBOX_1
0.25
p.L128I
DO43755
UCEC
ICGC
LRQRLMNVQ
DEG_APCC_DBOX_1
0.25
p.L128F
TCGA-EY-A1GI
UCEC
TCGA
LRQRLMNVQ
DEG_APCC_DBOX_1
0.25
p.L128F
DO41211
UCEC
ICGC
LRQRLMNVQ
DEG_APCC_DBOX_1
0.25
p.D127N
TCGA-FI-A2D0
UCEC
TCGA
LRQRLMNVQ
DEG_APCC_DBOX_1
0.2222
p.D127N
DO43891
UCEC
ICGC
LRQRLMNVQ
DEG_APCC_DBOX_1
0.2222
p.F140S
DO222837
MELA
ICGC
LRQRLMNVQ
DEG_APCC_DBOX_1
0.3056
p.D143N
ACH-001113
Lung Cancer
CCLE
LRQRLMNVQ
DEG_APCC_DBOX_1
0.2222
p.D143N
ACH-002156
Lung Cancer
CCLE
LRQRLMNVQ
DEG_APCC_DBOX_1
0.2222
p.D143N
LC-1-sq
lung
COSMIC
LRQRLMNVQ
DEG_APCC_DBOX_1
0.2222
Drug responses associated with HYLS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRQRLMNVQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96M11
Hydrolethalus syndrome protein 1
DEG_APCC_DBOX_1
131:139
LRQRLMNVQ
APC,CDC20,FZR1
0.9507
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