DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LRQRLTHVD
Uniprot ID:
Q9BSJ8
Source protein:
Extended synaptotagmin-1
Source gene:
ESYT1
Class:
DEG_APCC_DBOX_1
Location:
954:962
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5336
ASA_SCORE:
77.8222
COIL:
0.5018
CONS_SCORE:
0.267
DSS_SCORE:
0.5647
HELIX:
0.4437
FCONS_SCORE:
0.9129
RIG_SCORE:
0.7087
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P962T
TCGA-MP-A4TK
LUAD
TCGA
LRQRLTHVD
DEG_APCC_DBOX_1
0.7031
p.P968L
DO225294
BRCA
ICGC
LRQRLTHVD
DEG_APCC_DBOX_1
0.1667
p.P968L
DO227830
BRCA
ICGC
LRQRLTHVD
DEG_APCC_DBOX_1
0.1667
p.A967V
DO22237
LGG
ICGC
LRQRLTHVD
DEG_APCC_DBOX_1
0.1944
p.R955L
DO229041
LICA
ICGC
LRQRLTHVD
DEG_APCC_DBOX_1
0.8428
p.A969V
DO24527
LUAD
ICGC
LRQRLTHVD
DEG_APCC_DBOX_1
0.1389
p.P952T
DO45384
LUAD
ICGC
LRQRLTHVD
DEG_APCC_DBOX_1
0.2778
p.D962N
DO50723
ORCA
ICGC
LRQRLTHVD
DEG_APCC_DBOX_1
0.5821
p.G970E
DO41199
UCEC
ICGC
LRQRLTHVD
DEG_APCC_DBOX_1
0.1111
p.S951L
SIDM00789
Colorectal Carcinoma
GDSC
LRQRLTHVD
DEG_APCC_DBOX_1
0.25
p.S951L
SIDM00329
Hodgkin's Lymphoma
GDSC
LRQRLTHVD
DEG_APCC_DBOX_1
0.25
p.R967H
SIDM00789
Colorectal Carcinoma
GDSC
LRQRLTHVD
DEG_APCC_DBOX_1
0.1944
p.R967H
ACH-000954
Endometrial/Uterine Cancer
CCLE
LRQRLTHVD
DEG_APCC_DBOX_1
0.1944
p.R967H
ACH-000997
Colon/Colorectal Cancer
CCLE
LRQRLTHVD
DEG_APCC_DBOX_1
0.1944
p.R967H
ACH-001061
Colon/Colorectal Cancer
CCLE
LRQRLTHVD
DEG_APCC_DBOX_1
0.1944
p.R967H
HCT-15
large_intestine
COSMIC
LRQRLTHVD
DEG_APCC_DBOX_1
0.1944
p.S945R
SIDM01146
Gastric Carcinoma
GDSC
LRQRLTHVD
DEG_APCC_DBOX_1
0.0833
p.S945R
ACH-000932
Gastric Cancer
CCLE
LRQRLTHVD
DEG_APCC_DBOX_1
0.0833
p.S945R
NCI-SNU-1
stomach
COSMIC
LRQRLTHVD
DEG_APCC_DBOX_1
0.0833
p.L965I
CHSA8926
bone
COSMIC
LRQRLTHVD
DEG_APCC_DBOX_1
0.25
p.R957H
HCT-15
large_intestine
COSMIC
LRQRLTHVD
DEG_APCC_DBOX_1
0.7133
Drug responses associated with ESYT1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRQRLTHVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BSJ8
Extended synaptotagmin-1
DEG_APCC_DBOX_1
954:962
LRQRLTHVD
APC,CDC20,FZR1
0.5336
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