DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRQYLDSVP
Uniprot ID:
Q8IXR5
Source protein:
Protein FAM178B
Source gene:
FAM178B
Class:
DEG_APCC_DBOX_1
Location:
566:574
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.531
ASA_SCORE:
68.0333
COIL:
0.4853
CONS_SCORE:
0.6301
DSS_SCORE:
0.3773
HELIX:
0.4832
FCONS_SCORE:
1.235
RIG_SCORE:
0.7224
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K584N
TCGA-AA-3947
COAD
TCGA
LRQYLDSVP
DEG_APCC_DBOX_1
0.1667
p.P574S
TCGA-DF-A2KN
UCEC
TCGA
LRQYLDSVP
DEG_APCC_DBOX_1
0.5641
p.L570M
TCGA-EY-A2OP
UCEC
TCGA
LRQYLDSVP
DEG_APCC_DBOX_1
0.711
p.R562G
TCGA-GS-A9TQ
DLBC
TCGA
LRQYLDSVP
DEG_APCC_DBOX_1
0.2222
p.P563L
TCGA-VQ-A8P2
STAD
TCGA
LRQYLDSVP
DEG_APCC_DBOX_1
0.25
p.L566V
SIDM00855
Other Sarcomas
GDSC
LRQYLDSVP
DEG_APCC_DBOX_1
0.5654
p.L566V
G-402
soft_tissue
COSMIC
LRQYLDSVP
DEG_APCC_DBOX_1
0.5654
p.M561I
SIDM00551
Esophageal Squamous Cell Carcinoma
GDSC
LRQYLDSVP
DEG_APCC_DBOX_1
0.1944
p.M561I
ACH-002263
Esophageal Cancer
CCLE
LRQYLDSVP
DEG_APCC_DBOX_1
0.1944
p.M561I
KYSE-220
oesophagus
COSMIC
LRQYLDSVP
DEG_APCC_DBOX_1
0.1944
p.R567G
SIDM01617
Endometrial Carcinoma
GDSC
LRQYLDSVP
DEG_APCC_DBOX_1
0.7568
p.R567G
ACH-000994
Endometrial/Uterine Cancer
CCLE
LRQYLDSVP
DEG_APCC_DBOX_1
0.7568
p.E580K
ACH-000696
Ovarian Cancer
CCLE
LRQYLDSVP
DEG_APCC_DBOX_1
0.1667
Drug responses associated with FAM178B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRQYLDSVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IXR5
Protein FAM178B
DEG_APCC_DBOX_1
566:574
LRQYLDSVP
APC,CDC20,FZR1
0.531
More...