DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRRALGRMV
Uniprot ID:
Q7L2E3
Source protein:
ATP-dependent RNA helicase DHX30
Source gene:
DHX30
Class:
DEG_APCC_DBOX_1
Location:
1141:1149
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7189
ASA_SCORE:
33.7556
COIL:
0.0044
CONS_SCORE:
0.4829
DSS_SCORE:
0.1883
HELIX:
0.9952
FCONS_SCORE:
1.2079
RIG_SCORE:
0.7893
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1135M
TCGA-AA-A022
COAD
TCGA
LRRALGRMV
DEG_APCC_DBOX_1
0.1667
p.R1147C
TCGA-B5-A3FC
UCEC
TCGA
LRRALGRMV
DEG_APCC_DBOX_1
0.719
p.R1142W
TCGA-IB-7651
PAAD
TCGA
LRRALGRMV
DEG_APCC_DBOX_1
0.8634
p.R1133H
TCGA-XK-AAIW
PRAD
TCGA
LRRALGRMV
DEG_APCC_DBOX_1
0.1111
p.E1139Q
DO44564
LGG
ICGC
LRRALGRMV
DEG_APCC_DBOX_1
0.7222
p.A1145V
DO228138
PBCA
ICGC
LRRALGRMV
DEG_APCC_DBOX_1
0.6936
p.R1151Q
SIDM01954
Colorectal Carcinoma
GDSC
LRRALGRMV
DEG_APCC_DBOX_1
0.2778
p.R1143Q
ACH-000520
Ovarian Cancer
CCLE
LRRALGRMV
DEG_APCC_DBOX_1
0.6218
p.M1148L
ACH-000896
Bladder Cancer
CCLE
LRRALGRMV
DEG_APCC_DBOX_1
0.5999
p.M1148L
647-V
urinary_tract
COSMIC
LRRALGRMV
DEG_APCC_DBOX_1
0.5999
Drug responses associated with DHX30 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRRALGRMV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7L2E3
ATP-dependent RNA helicase DHX30
DEG_APCC_DBOX_1
1141:1149
LRRALGRMV
APC,CDC20,FZR1
0.7189
More...