DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRRELAKVE
Uniprot ID:
P55327
Source protein:
Tumor protein D52
Source gene:
TPD52
Class:
DEG_APCC_DBOX_1
Location:
79:87
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8303
ASA_SCORE:
78.6333
COIL:
0.0481
CONS_SCORE:
0.7172
DSS_SCORE:
0.4337
HELIX:
0.9512
FCONS_SCORE:
1.1633
RIG_SCORE:
0.7969
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S72L
TCGA-AX-A05S
UCEC
TCGA
LRRELAKVE
DEG_APCC_DBOX_1
0.1389
p.E82Q
TCGA-BA-5152
HNSC
TCGA
LRRELAKVE
DEG_APCC_DBOX_1
0.5633
p.E82Q
DO14393
HNSC
ICGC
LRRELAKVE
DEG_APCC_DBOX_1
0.5633
p.Q95E
TCGA-C8-A1HM
BRCA
TCGA
LRRELAKVE
DEG_APCC_DBOX_1
0.1111
p.Q95E
DO3904
BRCA
ICGC
LRRELAKVE
DEG_APCC_DBOX_1
0.1111
p.Q91K
TCGA-DA-A1IB
SKCM
TCGA
LRRELAKVE
DEG_APCC_DBOX_1
0.2222
p.Q91K
DO38033
SKCM
ICGC
LRRELAKVE
DEG_APCC_DBOX_1
0.2222
p.L97I
DO234389
ESAD
ICGC
LRRELAKVE
DEG_APCC_DBOX_1
0.0556
p.A84G
SIDM00388
B-Cell Non-Hodgkin's Lymphoma
GDSC
LRRELAKVE
DEG_APCC_DBOX_1
0.6429
p.A84G
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
LRRELAKVE
DEG_APCC_DBOX_1
0.6429
p.E73K
SIDM01561
Melanoma
GDSC
LRRELAKVE
DEG_APCC_DBOX_1
0.1667
Drug responses associated with TPD52 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRRELAKVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P55327
Tumor protein D52
DEG_APCC_DBOX_1
79:87
LRRELAKVE
APC,CDC20,FZR1
0.8303
More...