DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRRELRELQ
Uniprot ID:
O15061
Source protein:
Synemin
Source gene:
SYNM
Class:
DEG_APCC_DBOX_1
Location:
88:96
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5551
ASA_SCORE:
78.5444
COIL:
0.0062
CONS_SCORE:
0.6674
DSS_SCORE:
0.3246
HELIX:
0.9938
FCONS_SCORE:
1.1615
RIG_SCORE:
0.7965
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T78P
TCGA-DD-AACE
LIHC
TCGA
LRRELRELQ
DEG_APCC_DBOX_1
0.0556
p.T78P
DO52200
LIHC
ICGC
LRRELRELQ
DEG_APCC_DBOX_1
0.0556
p.A87V
DO51918
BLCA
ICGC
LRRELRELQ
DEG_APCC_DBOX_1
0.3056
p.N83S
DO51816
LGG
ICGC
LRRELRELQ
DEG_APCC_DBOX_1
0.1944
p.N83S
DO23460
LINC
ICGC
LRRELRELQ
DEG_APCC_DBOX_1
0.1944
p.S81I
DO229035
LICA
ICGC
LRRELRELQ
DEG_APCC_DBOX_1
0.1389
p.Q99E
DO52686
MALY
ICGC
LRRELRELQ
DEG_APCC_DBOX_1
0.25
p.G105R
DO37415
SKCM
ICGC
LRRELRELQ
DEG_APCC_DBOX_1
0.0833
p.R106C
SIDM01289
Esophageal Carcinoma
GDSC
LRRELRELQ
DEG_APCC_DBOX_1
0.0556
p.H95Q
ACH-000794
Head and Neck Cancer
CCLE
LRRELRELQ
DEG_APCC_DBOX_1
0.7582
p.H95Q
BICR22
upper_aerodigestive_tract
COSMIC
LRRELRELQ
DEG_APCC_DBOX_1
0.7582
p.E94K
ACH-000980
Lung Cancer
CCLE
LRRELRELQ
DEG_APCC_DBOX_1
0.591
p.R96C
CTB-1
haematopoietic_and_lymphoid_tissue
COSMIC
LRRELRELQ
DEG_APCC_DBOX_1
0.8301
Drug responses associated with SYNM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRRELRELQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15061
Synemin
DEG_APCC_DBOX_1
88:96
LRRELRELQ
APC,CDC20,FZR1
0.5551
More...