DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LRRRLERLR
Uniprot ID:
Q96SM3
Source protein:
Probable carboxypeptidase X1
Source gene:
CPXM1
Class:
DEG_APCC_DBOX_1
Location:
722:730
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8554
ASA_SCORE:
100.3444
COIL:
0.1514
CONS_SCORE:
0.4397
DSS_SCORE:
0.6574
HELIX:
0.8577
FCONS_SCORE:
1.1535
RIG_SCORE:
0.7637
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P719S
TCGA-56-A62T
LUSC
TCGA
LRRRLERLR
DEG_APCC_DBOX_1
0.25
p.P719S
DO219144
LUSC
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.25
p.R730M
TCGA-60-2719
LUSC
TCGA
LRRRLERLR
DEG_APCC_DBOX_1
0.7521
p.R730M
DO27453
LUSC
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.7521
p.A716T
TCGA-AX-A2HC
UCEC
TCGA
LRRRLERLR
DEG_APCC_DBOX_1
0.1667
p.A716T
DO41572
UCEC
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.1667
p.L726P
TCGA-EJ-8469
PRAD
TCGA
LRRRLERLR
DEG_APCC_DBOX_1
0.7582
p.L726P
DO46810
PRAD
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.7582
p.D721N
TCGA-GF-A6C9
SKCM
TCGA
LRRRLERLR
DEG_APCC_DBOX_1
0.3056
p.D721N
DO51254
SKCM
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.3056
p.L722R
TCGA-HU-8245
STAD
TCGA
LRRRLERLR
DEG_APCC_DBOX_1
0.7316
p.L722R
DO47929
STAD
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.7316
p.R728Q
DO229377
BTCA
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.6218
p.R728Q
DO50412
ESAD
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.6218
p.R728W
DO50434
ESAD
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.7523
p.A713E
DO229028
LICA
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.0833
p.R723C
DO23356
LINC
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.8301
p.R723C
DO50305
PAEN
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.8301
p.R725C
DO49200
PACA
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.719
p.R725C
SIDM00806
Osteosarcoma
GDSC
LRRRLERLR
DEG_APCC_DBOX_1
0.719
p.R725C
HOS
bone
COSMIC
LRRRLERLR
DEG_APCC_DBOX_1
0.719
p.R725H
DO47234
RECA
ICGC
LRRRLERLR
DEG_APCC_DBOX_1
0.7133
p.V718L
SIDM00333
Endometrial Carcinoma
GDSC
LRRRLERLR
DEG_APCC_DBOX_1
0.2222
p.V718L
ACH-000988
Endometrial/Uterine Cancer
CCLE
LRRRLERLR
DEG_APCC_DBOX_1
0.2222
p.V718L
MFE-319
endometrium
COSMIC
LRRRLERLR
DEG_APCC_DBOX_1
0.2222
p.K733E
SIDM00750
Non-Small Cell Lung Carcinoma
GDSC
LRRRLERLR
DEG_APCC_DBOX_1
0.3611
p.K733E
ACH-000869
Lung Cancer
CCLE
LRRRLERLR
DEG_APCC_DBOX_1
0.3611
p.K733E
NCI-H1568
lung
COSMIC
LRRRLERLR
DEG_APCC_DBOX_1
0.3611
p.E727G
ACH-000989
Colon/Colorectal Cancer
CCLE
LRRRLERLR
DEG_APCC_DBOX_1
0.6087
p.E727G
SNU-175
large_intestine
COSMIC
LRRRLERLR
DEG_APCC_DBOX_1
0.6087
Drug responses associated with CPXM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRRRLERLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96SM3
Probable carboxypeptidase X1
DEG_APCC_DBOX_1
722:730
LRRRLERLR
APC,CDC20,FZR1
0.8554
More...