DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRRTLQGLE
Uniprot ID:
P08727
Source protein:
Keratin, type I cytoskeletal 19
Source gene:
KRT19
Class:
DEG_APCC_DBOX_1
Location:
299:307
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6901
ASA_SCORE:
94.2556
COIL:
0.0251
CONS_SCORE:
0.9336
DSS_SCORE:
0.3127
HELIX:
0.9759
FCONS_SCORE:
1.0452
RIG_SCORE:
0.8009
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D298E
TCGA-27-1833
GBM
TCGA
LRRTLQGLE
DEG_APCC_DBOX_1
0.3056
p.D298E
DO12976
GBM
ICGC
LRRTLQGLE
DEG_APCC_DBOX_1
0.3056
p.R301H
TCGA-AX-A0J1
UCEC
TCGA
LRRTLQGLE
DEG_APCC_DBOX_1
0.7133
p.R301H
TCGA-B5-A11E
UCEC
TCGA
LRRTLQGLE
DEG_APCC_DBOX_1
0.7133
p.R301H
TCGA-R5-A7ZI
STAD
TCGA
LRRTLQGLE
DEG_APCC_DBOX_1
0.7133
p.R301H
DO222342
STAD
ICGC
LRRTLQGLE
DEG_APCC_DBOX_1
0.7133
p.R301H
DO41644
UCEC
ICGC
LRRTLQGLE
DEG_APCC_DBOX_1
0.7133
p.R301H
DO41199
UCEC
ICGC
LRRTLQGLE
DEG_APCC_DBOX_1
0.7133
p.R301H
ACH-001610
Brain Cancer
CCLE
LRRTLQGLE
DEG_APCC_DBOX_1
0.7133
p.G305D
TCGA-VQ-A8P2
STAD
TCGA
LRRTLQGLE
DEG_APCC_DBOX_1
0.6087
p.G305D
DO51761
STAD
ICGC
LRRTLQGLE
DEG_APCC_DBOX_1
0.6087
p.T297I
TCGA-YU-A90W
TGCT
TCGA
LRRTLQGLE
DEG_APCC_DBOX_1
0.2778
p.E307Q
TCGA-ZF-A9R2
BLCA
TCGA
LRRTLQGLE
DEG_APCC_DBOX_1
0.5633
p.E307Q
DO219058
BLCA
ICGC
LRRTLQGLE
DEG_APCC_DBOX_1
0.5633
p.Q311K
DO229034
LICA
ICGC
LRRTLQGLE
DEG_APCC_DBOX_1
0.2222
p.L303F
DO220913
MELA
ICGC
LRRTLQGLE
DEG_APCC_DBOX_1
0.6981
p.E307D
SIDM00630
Breast Carcinoma
GDSC
LRRTLQGLE
DEG_APCC_DBOX_1
0.5647
p.E307D
ACH-000876
Breast Cancer
CCLE
LRRTLQGLE
DEG_APCC_DBOX_1
0.5647
p.M316R
SIDM00513
Non-Small Cell Lung Carcinoma
GDSC
LRRTLQGLE
DEG_APCC_DBOX_1
0.0833
p.M316R
SIDM00511
Small Cell Lung Carcinoma
GDSC
LRRTLQGLE
DEG_APCC_DBOX_1
0.0833
p.M316R
SIDM01624
Bladder Carcinoma
GDSC
LRRTLQGLE
DEG_APCC_DBOX_1
0.0833
p.M316R
SIDM01529
Bladder Carcinoma
GDSC
LRRTLQGLE
DEG_APCC_DBOX_1
0.0833
p.M316R
SIDM01760
Rhabdomyosarcoma
GDSC
LRRTLQGLE
DEG_APCC_DBOX_1
0.0833
p.R300W
SIDM00185
Melanoma
GDSC
LRRTLQGLE
DEG_APCC_DBOX_1
0.8634
p.R300W
SIDM01650
Non-Cancerous
GDSC
LRRTLQGLE
DEG_APCC_DBOX_1
0.8634
p.R300W
ACH-002354
Non-Cancerous
CCLE
LRRTLQGLE
DEG_APCC_DBOX_1
0.8634
p.E295K
SIDM00889
Cervical Carcinoma
GDSC
LRRTLQGLE
DEG_APCC_DBOX_1
0.2222
p.E295K
ACH-001333
Cervical Cancer
CCLE
LRRTLQGLE
DEG_APCC_DBOX_1
0.2222
p.E295K
C-33-A
cervix
COSMIC
LRRTLQGLE
DEG_APCC_DBOX_1
0.2222
p.T302S
SIDM00244
Neuroblastoma
GDSC
LRRTLQGLE
DEG_APCC_DBOX_1
0.7116
p.T302S
ACH-002083
Neuroblastoma
CCLE
LRRTLQGLE
DEG_APCC_DBOX_1
0.7116
p.T302S
NB69
autonomic_ganglia
COSMIC
LRRTLQGLE
DEG_APCC_DBOX_1
0.7116
p.Q304K
ACH-000740
Head and Neck Cancer
CCLE
LRRTLQGLE
DEG_APCC_DBOX_1
0.5833
Drug responses associated with KRT19 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRRTLQGLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P08727
Keratin, type I cytoskeletal 19
DEG_APCC_DBOX_1
299:307
LRRTLQGLE
APC,CDC20,FZR1
0.6901
More...