DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRSALRVLQ
Uniprot ID:
Q9P1Z2
Source protein:
Calcium-binding and coiled-coil domain-containing protein 1
Source gene:
CALCOCO1
Class:
DEG_APCC_DBOX_1
Location:
475:483
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6499
ASA_SCORE:
92.2
COIL:
0.0139
CONS_SCORE:
0.5473
DSS_SCORE:
0.3157
HELIX:
0.9869
FCONS_SCORE:
1.0571
RIG_SCORE:
0.7814
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R480C
TCGA-B5-A5OC
UCEC
TCGA
LRSALRVLQ
DEG_APCC_DBOX_1
0.719
p.R480C
TCGA-FI-A2D5
UCEC
TCGA
LRSALRVLQ
DEG_APCC_DBOX_1
0.719
p.R480C
DO52405
UCEC
ICGC
LRSALRVLQ
DEG_APCC_DBOX_1
0.719
p.R480C
DO41331
UCEC
ICGC
LRSALRVLQ
DEG_APCC_DBOX_1
0.719
p.R480C
SIDM00334
Endometrial Carcinoma
GDSC
LRSALRVLQ
DEG_APCC_DBOX_1
0.719
p.R480C
ACH-000879
Endometrial/Uterine Cancer
CCLE
LRSALRVLQ
DEG_APCC_DBOX_1
0.719
p.E492V
TCGA-BR-6458
STAD
TCGA
LRSALRVLQ
DEG_APCC_DBOX_1
0.0833
p.E492V
DO38296
STAD
ICGC
LRSALRVLQ
DEG_APCC_DBOX_1
0.0833
p.T473I
TCGA-BS-A0U8
UCEC
TCGA
LRSALRVLQ
DEG_APCC_DBOX_1
0.2778
p.T473I
DO41380
UCEC
ICGC
LRSALRVLQ
DEG_APCC_DBOX_1
0.2778
p.K486N
TCGA-EE-A29E
SKCM
TCGA
LRSALRVLQ
DEG_APCC_DBOX_1
0.3611
p.K486N
DO37831
SKCM
ICGC
LRSALRVLQ
DEG_APCC_DBOX_1
0.3611
p.E471A
TCGA-GM-A2DL
BRCA
TCGA
LRSALRVLQ
DEG_APCC_DBOX_1
0.2222
p.E471A
DO1497
BRCA
ICGC
LRSALRVLQ
DEG_APCC_DBOX_1
0.2222
p.R470L
TCGA-GN-A266
SKCM
TCGA
LRSALRVLQ
DEG_APCC_DBOX_1
0.1944
p.R470L
DO37432
SKCM
ICGC
LRSALRVLQ
DEG_APCC_DBOX_1
0.1944
p.L475M
TCGA-VN-A88M
PRAD
TCGA
LRSALRVLQ
DEG_APCC_DBOX_1
0.5999
p.L475M
DO49857
PRAD
ICGC
LRSALRVLQ
DEG_APCC_DBOX_1
0.5999
p.R480H
DO225337
BRCA
ICGC
LRSALRVLQ
DEG_APCC_DBOX_1
0.7133
p.Q490K
DO228974
LICA
ICGC
LRSALRVLQ
DEG_APCC_DBOX_1
0.1389
p.Q490H
DO232224
PBCA
ICGC
LRSALRVLQ
DEG_APCC_DBOX_1
0.1389
p.R476Q
SIDM00596
Endometrial Carcinoma
GDSC
LRSALRVLQ
DEG_APCC_DBOX_1
0.7329
p.R476Q
ACH-000941
Endometrial/Uterine Cancer
CCLE
LRSALRVLQ
DEG_APCC_DBOX_1
0.7329
p.R476Q
ACH-000954
Endometrial/Uterine Cancer
CCLE
LRSALRVLQ
DEG_APCC_DBOX_1
0.7329
p.R476Q
ACH-001517
Endometrial/Uterine Cancer
CCLE
LRSALRVLQ
DEG_APCC_DBOX_1
0.7329
p.R476Q
HEC-1
endometrium
COSMIC
LRSALRVLQ
DEG_APCC_DBOX_1
0.7329
Drug responses associated with CALCOCO1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRSALRVLQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P1Z2
Calcium-binding and coiled-coil domain-containing protein 1
DEG_APCC_DBOX_1
475:483
LRSALRVLQ
APC,CDC20,FZR1
0.6499
More...