DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRSDLDDVD
Uniprot ID:
Q9UPU5
Source protein:
Ubiquitin carboxyl-terminal hydrolase 24
Source gene:
USP24
Class:
DEG_APCC_DBOX_1
Location:
2611:2619
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9177
ASA_SCORE:
90.1333
COIL:
0.6348
CONS_SCORE:
0.3353
DSS_SCORE:
0.8814
HELIX:
0.3461
FCONS_SCORE:
1.011
RIG_SCORE:
0.7112
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2602L
TCGA-33-AASD
LUSC
TCGA
LRSDLDDVD
DEG_APCC_DBOX_1
0.5278
p.E2610K
TCGA-CN-A498
HNSC
TCGA
LRSDLDDVD
DEG_APCC_DBOX_1
0.3056
p.E2610K
DO52038
HNSC
ICGC
LRSDLDDVD
DEG_APCC_DBOX_1
0.3056
p.P2605L
TCGA-D3-A8GM
SKCM
TCGA
LRSDLDDVD
DEG_APCC_DBOX_1
0.1667
p.P2605L
DO50288
SKCM
ICGC
LRSDLDDVD
DEG_APCC_DBOX_1
0.1667
p.M2606T
TCGA-DX-A1L2
SARC
TCGA
LRSDLDDVD
DEG_APCC_DBOX_1
0.1944
p.M2606T
DO219951
SARC
ICGC
LRSDLDDVD
DEG_APCC_DBOX_1
0.1944
p.D2614G
DO51082
PRAD
ICGC
LRSDLDDVD
DEG_APCC_DBOX_1
0.6087
p.R2612K
DO229502
SKCA
ICGC
LRSDLDDVD
DEG_APCC_DBOX_1
0.7237
p.D2616E
SIDM00545
Melanoma
GDSC
LRSDLDDVD
DEG_APCC_DBOX_1
0.5647
p.D2616E
ACH-000987
Skin Cancer
CCLE
LRSDLDDVD
DEG_APCC_DBOX_1
0.5647
p.D2616E
Mewo
skin
COSMIC
LRSDLDDVD
DEG_APCC_DBOX_1
0.5647
p.P2620L
ACH-001367
Neuroblastoma
CCLE
LRSDLDDVD
DEG_APCC_DBOX_1
0.3056
Drug responses associated with USP24 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRSDLDDVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPU5
Ubiquitin carboxyl-terminal hydrolase 24
DEG_APCC_DBOX_1
2611:2619
LRSDLDDVD
APC,CDC20,FZR1
0.9177
More...