DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LRSELNLLV
Uniprot ID:
Q9UPN3
Source protein:
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5
Source gene:
MACF1
Class:
DEG_APCC_DBOX_1
Location:
1131:1139
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.827
ASA_SCORE:
53.3667
COIL:
0.0097
CONS_SCORE:
0.3651
DSS_SCORE:
0.2409
HELIX:
0.9878
FCONS_SCORE:
1.1992
RIG_SCORE:
0.8034
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1127I
TCGA-55-7907
LUAD
TCGA
LRSELNLLV
DEG_APCC_DBOX_1
0.2222
p.S1127I
DO25396
LUAD
ICGC
LRSELNLLV
DEG_APCC_DBOX_1
0.2222
p.R1132P
TCGA-55-8089
LUAD
TCGA
LRSELNLLV
DEG_APCC_DBOX_1
0.7512
p.R1132P
DO23690
LUAD
ICGC
LRSELNLLV
DEG_APCC_DBOX_1
0.7512
p.L1131R
TCGA-CV-A45Z
HNSC
TCGA
LRSELNLLV
DEG_APCC_DBOX_1
0.7316
p.L1131R
DO52064
HNSC
ICGC
LRSELNLLV
DEG_APCC_DBOX_1
0.7316
p.S1124C
TCGA-DX-AB2O
SARC
TCGA
LRSELNLLV
DEG_APCC_DBOX_1
0.5833
p.S1124C
DO220083
SARC
ICGC
LRSELNLLV
DEG_APCC_DBOX_1
0.5833
p.P1123L
TCGA-EB-A430
SKCM
TCGA
LRSELNLLV
DEG_APCC_DBOX_1
0.1111
p.P1123L
DO37906
SKCM
ICGC
LRSELNLLV
DEG_APCC_DBOX_1
0.1111
p.G1147C
TCGA-EE-A3AD
SKCM
TCGA
LRSELNLLV
DEG_APCC_DBOX_1
0.1111
p.G1147C
DO37707
SKCM
ICGC
LRSELNLLV
DEG_APCC_DBOX_1
0.1111
p.Q1121H
DO228985
LICA
ICGC
LRSELNLLV
DEG_APCC_DBOX_1
0.0556
p.A1135T
SIDM00933
Breast Carcinoma
GDSC
LRSELNLLV
DEG_APCC_DBOX_1
0.7139
p.A1135T
CAL-51
breast
COSMIC
LRSELNLLV
DEG_APCC_DBOX_1
0.7139
p.E1149K
SW1573
lung
COSMIC
LRSELNLLV
DEG_APCC_DBOX_1
0.0556
p.L1142Q
NCI-H1651
lung
COSMIC
LRSELNLLV
DEG_APCC_DBOX_1
0.25
p.A1121G
RL95-2
endometrium
COSMIC
LRSELNLLV
DEG_APCC_DBOX_1
0.0556
p.Q1130H
NCI-H660
prostate
COSMIC
LRSELNLLV
DEG_APCC_DBOX_1
0.3056
p.E1127G
EN
endometrium
COSMIC
LRSELNLLV
DEG_APCC_DBOX_1
0.2222
p.A1137T
GP5d
large_intestine
COSMIC
LRSELNLLV
DEG_APCC_DBOX_1
0.7139
Drug responses associated with MACF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRSELNLLV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPN3
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5
DEG_APCC_DBOX_1
1131:1139
LRSELNLLV
APC,CDC20,FZR1
0.827
More...