DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LRSKLSNVA
Uniprot ID:
Q9H598
Source protein:
Vesicular inhibitory amino acid transporter
Source gene:
SLC32A1
Class:
DEG_APCC_DBOX_1
Location:
5:13
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8634
ASA_SCORE:
85.0778
COIL:
0.2949
CONS_SCORE:
0.2655
DSS_SCORE:
0.4523
HELIX:
0.687
FCONS_SCORE:
0.9952
RIG_SCORE:
0.7676
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R6C
TCGA-A6-2686
COAD
TCGA
LRSKLSNVA
DEG_APCC_DBOX_1
0.8301
p.R6C
TCGA-FP-A4BE
STAD
TCGA
LRSKLSNVA
DEG_APCC_DBOX_1
0.8301
p.R6C
DO7828
COAD
ICGC
LRSKLSNVA
DEG_APCC_DBOX_1
0.8301
p.R6C
DO48016
STAD
ICGC
LRSKLSNVA
DEG_APCC_DBOX_1
0.8301
p.R6S
TCGA-AA-3989
COAD
TCGA
LRSKLSNVA
DEG_APCC_DBOX_1
0.7427
p.R6S
DO9666
COAD
ICGC
LRSKLSNVA
DEG_APCC_DBOX_1
0.7427
p.A2T
TCGA-DF-A2KU
UCEC
TCGA
LRSKLSNVA
DEG_APCC_DBOX_1
0.6944
p.A2T
DO223286
UCEC
ICGC
LRSKLSNVA
DEG_APCC_DBOX_1
0.6944
p.R6H
DO234336
ESAD
ICGC
LRSKLSNVA
DEG_APCC_DBOX_1
0.8244
p.A22S
DO228976
LICA
ICGC
LRSKLSNVA
DEG_APCC_DBOX_1
0.0833
p.T14M
DO232052
ORCA
ICGC
LRSKLSNVA
DEG_APCC_DBOX_1
0.3056
p.K23N
DO51514
PACA
ICGC
LRSKLSNVA
DEG_APCC_DBOX_1
0.1667
p.L9M
SIDM00945
Colorectal Carcinoma
GDSC
LRSKLSNVA
DEG_APCC_DBOX_1
0.711
p.L9M
ACH-000895
Colon/Colorectal Cancer
CCLE
LRSKLSNVA
DEG_APCC_DBOX_1
0.711
p.L9M
CL-34
large_intestine
COSMIC
LRSKLSNVA
DEG_APCC_DBOX_1
0.711
p.A2D
SIDM00744
Non-Small Cell Lung Carcinoma
GDSC
LRSKLSNVA
DEG_APCC_DBOX_1
0.6944
p.A2D
ACH-000893
Lung Cancer
CCLE
LRSKLSNVA
DEG_APCC_DBOX_1
0.6944
p.A2D
NCI-H1651
lung
COSMIC
LRSKLSNVA
DEG_APCC_DBOX_1
0.6944
Drug responses associated with SLC32A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRSKLSNVA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H598
Vesicular inhibitory amino acid transporter
DEG_APCC_DBOX_1
5:13
LRSKLSNVA
APC,CDC20,FZR1
0.8634
More...