DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRSLLQILR
Uniprot ID:
Q7Z4F1
Source protein:
Low-density lipoprotein receptor-related protein 10
Source gene:
LRP10
Class:
DEG_APCC_DBOX_1
Location:
525:533
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.679
ASA_SCORE:
71.4333
COIL:
0.4817
CONS_SCORE:
0.4899
DSS_SCORE:
0.4868
HELIX:
0.41
FCONS_SCORE:
1.1029
RIG_SCORE:
0.8108
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R526H
TCGA-AA-3877
COAD
TCGA
LRSLLQILR
DEG_APCC_DBOX_1
0.8244
p.R526H
TCGA-L5-A4OI
ESCA
TCGA
LRSLLQILR
DEG_APCC_DBOX_1
0.8244
p.R526H
DO7855
COAD
ICGC
LRSLLQILR
DEG_APCC_DBOX_1
0.8244
p.R526C
TCGA-AZ-4315
COAD
TCGA
LRSLLQILR
DEG_APCC_DBOX_1
0.8301
p.R526C
DO8842
COAD
ICGC
LRSLLQILR
DEG_APCC_DBOX_1
0.8301
p.S527F
TCGA-EL-A3CT
THCA
TCGA
LRSLLQILR
DEG_APCC_DBOX_1
0.6871
p.S527F
DO48113
THCA
ICGC
LRSLLQILR
DEG_APCC_DBOX_1
0.6871
p.N517D
TCGA-J2-A4AD
LUAD
TCGA
LRSLLQILR
DEG_APCC_DBOX_1
0.1111
p.N517D
DO23915
LUAD
ICGC
LRSLLQILR
DEG_APCC_DBOX_1
0.1111
p.D518N
SIDM00615
Hepatocellular Carcinoma
GDSC
LRSLLQILR
DEG_APCC_DBOX_1
0.1389
p.D518N
SIDM00617
Hepatocellular Carcinoma
GDSC
LRSLLQILR
DEG_APCC_DBOX_1
0.1389
p.D518N
SIDM00157
Neuroblastoma
GDSC
LRSLLQILR
DEG_APCC_DBOX_1
0.1389
p.D518N
SIDM00283
B-Cell Non-Hodgkin's Lymphoma
GDSC
LRSLLQILR
DEG_APCC_DBOX_1
0.1389
p.D518N
SIDM00982
Glioblastoma
GDSC
LRSLLQILR
DEG_APCC_DBOX_1
0.1389
p.D518N
SIDM01464
Pancreatic Carcinoma
GDSC
LRSLLQILR
DEG_APCC_DBOX_1
0.1389
p.P516T
SIDM00256
Neuroblastoma
GDSC
LRSLLQILR
DEG_APCC_DBOX_1
0.0833
p.P516T
ACH-002281
Neuroblastoma
CCLE
LRSLLQILR
DEG_APCC_DBOX_1
0.0833
p.P516T
NB14
autonomic_ganglia
COSMIC
LRSLLQILR
DEG_APCC_DBOX_1
0.0833
Drug responses associated with LRP10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRSLLQILR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z4F1
Low-density lipoprotein receptor-related protein 10
DEG_APCC_DBOX_1
525:533
LRSLLQILR
APC,CDC20,FZR1
0.679
More...