DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRSNLGSVV
Uniprot ID:
O43143
Source protein:
ATP-dependent RNA helicase DHX15
Source gene:
DHX15
Class:
DEG_APCC_DBOX_1
Location:
503:511
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5468
ASA_SCORE:
25.7444
COIL:
0.2594
CONS_SCORE:
0.7139
DSS_SCORE:
0.1364
HELIX:
0.5774
FCONS_SCORE:
1.1945
RIG_SCORE:
0.8316
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T498I
TCGA-A5-A0G1
UCEC
TCGA
LRSNLGSVV
DEG_APCC_DBOX_1
0.1944
p.T498I
TCGA-CG-4306
STAD
TCGA
LRSNLGSVV
DEG_APCC_DBOX_1
0.1944
p.T498I
DO38567
STAD
ICGC
LRSNLGSVV
DEG_APCC_DBOX_1
0.1944
p.T498I
DO42472
UCEC
ICGC
LRSNLGSVV
DEG_APCC_DBOX_1
0.1944
p.Y499N
TCGA-AN-A0XV
BRCA
TCGA
LRSNLGSVV
DEG_APCC_DBOX_1
0.6667
p.Y499N
DO2913
BRCA
ICGC
LRSNLGSVV
DEG_APCC_DBOX_1
0.6667
p.T498A
TCGA-AX-A1CE
UCEC
TCGA
LRSNLGSVV
DEG_APCC_DBOX_1
0.1944
p.T498A
DO42280
UCEC
ICGC
LRSNLGSVV
DEG_APCC_DBOX_1
0.1944
p.N497K
TCGA-VT-A80G
SARC
TCGA
LRSNLGSVV
DEG_APCC_DBOX_1
0.1667
p.N497K
DO220287
SARC
ICGC
LRSNLGSVV
DEG_APCC_DBOX_1
0.1667
p.D496H
DO223010
ESCA
ICGC
LRSNLGSVV
DEG_APCC_DBOX_1
0.1389
p.D496H
SIDM01617
Endometrial Carcinoma
GDSC
LRSNLGSVV
DEG_APCC_DBOX_1
0.1389
p.Y499C
DO52345
LUSC
ICGC
LRSNLGSVV
DEG_APCC_DBOX_1
0.6667
p.S509L
DO47064
RECA
ICGC
LRSNLGSVV
DEG_APCC_DBOX_1
0.7667
p.L514W
SIDM00483
Esophageal Carcinoma
GDSC
LRSNLGSVV
DEG_APCC_DBOX_1
0.25
p.L514W
ACH-001654
Esophageal Cancer
CCLE
LRSNLGSVV
DEG_APCC_DBOX_1
0.25
p.L514W
SK-GT-4
oesophagus
COSMIC
LRSNLGSVV
DEG_APCC_DBOX_1
0.25
Drug responses associated with DHX15 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRSNLGSVV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43143
ATP-dependent RNA helicase DHX15
DEG_APCC_DBOX_1
503:511
LRSNLGSVV
APC,CDC20,FZR1
0.5468
More...