DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRSPLQPLI
Uniprot ID:
Q7Z4F1
Source protein:
Low-density lipoprotein receptor-related protein 10
Source gene:
LRP10
Class:
DEG_APCC_DBOX_1
Location:
87:95
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.761
ASA_SCORE:
77.3889
COIL:
0.8357
CONS_SCORE:
0.4716
DSS_SCORE:
0.1944
HELIX:
0.0934
FCONS_SCORE:
0.8147
RIG_SCORE:
0.7867
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R88C
TCGA-AJ-A3OK
UCEC
TCGA
LRSPLQPLI
DEG_APCC_DBOX_1
0.8301
p.R88C
DO43602
UCEC
ICGC
LRSPLQPLI
DEG_APCC_DBOX_1
0.8301
p.R88C
SIDM00932
Kidney Carcinoma
GDSC
LRSPLQPLI
DEG_APCC_DBOX_1
0.8301
p.R88C
ACH-000457
Kidney Cancer
CCLE
LRSPLQPLI
DEG_APCC_DBOX_1
0.8301
p.R88C
CAL-54
kidney
COSMIC
LRSPLQPLI
DEG_APCC_DBOX_1
0.8301
p.R84H
TCGA-VQ-A8P2
STAD
TCGA
LRSPLQPLI
DEG_APCC_DBOX_1
0.25
p.R84H
DO51761
STAD
ICGC
LRSPLQPLI
DEG_APCC_DBOX_1
0.25
p.L87V
SIDM01409
Bladder Carcinoma
GDSC
LRSPLQPLI
DEG_APCC_DBOX_1
0.5654
p.L87V
ACH-000834
Bladder Cancer
CCLE
LRSPLQPLI
DEG_APCC_DBOX_1
0.5654
Drug responses associated with LRP10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRSPLQPLI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z4F1
Low-density lipoprotein receptor-related protein 10
DEG_APCC_DBOX_1
87:95
LRSPLQPLI
APC,CDC20,FZR1
0.761
More...