DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRSQLQTLK
Uniprot ID:
Q8N998
Source protein:
Coiled-coil domain-containing protein 89
Source gene:
CCDC89
Class:
DEG_APCC_DBOX_1
Location:
229:237
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8836
ASA_SCORE:
85.0444
COIL:
0.0319
CONS_SCORE:
0.5385
DSS_SCORE:
0.4429
HELIX:
0.968
FCONS_SCORE:
1.2531
RIG_SCORE:
0.7371
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H240L
TCGA-17-Z026
LUAD
TCGA
LRSQLQTLK
DEG_APCC_DBOX_1
0.25
p.Q234L
TCGA-44-2659
LUAD
TCGA
LRSQLQTLK
DEG_APCC_DBOX_1
0.6654
p.Q234L
DO23744
LUAD
ICGC
LRSQLQTLK
DEG_APCC_DBOX_1
0.6654
p.Q242L
TCGA-50-5930
LUAD
TCGA
LRSQLQTLK
DEG_APCC_DBOX_1
0.1944
p.Q242L
DO25189
LUAD
ICGC
LRSQLQTLK
DEG_APCC_DBOX_1
0.1944
p.R230C
TCGA-AP-A0LM
UCEC
TCGA
LRSQLQTLK
DEG_APCC_DBOX_1
0.8301
p.R230C
DO43306
UCEC
ICGC
LRSQLQTLK
DEG_APCC_DBOX_1
0.8301
p.E245K
TCGA-D3-A8GL
SKCM
TCGA
LRSQLQTLK
DEG_APCC_DBOX_1
0.1111
p.E245K
DO50287
SKCM
ICGC
LRSQLQTLK
DEG_APCC_DBOX_1
0.1111
p.K237N
TCGA-EO-A3AV
UCEC
TCGA
LRSQLQTLK
DEG_APCC_DBOX_1
0.5806
p.K237N
DO52412
UCEC
ICGC
LRSQLQTLK
DEG_APCC_DBOX_1
0.5806
p.T223I
DO222702
MELA
ICGC
LRSQLQTLK
DEG_APCC_DBOX_1
0.1667
p.A219D
SIDM00636
Non-Cancerous
GDSC
LRSQLQTLK
DEG_APCC_DBOX_1
0.0556
p.A219D
MC-CAR
haematopoietic_and_lymphoid_tissue
COSMIC
LRSQLQTLK
DEG_APCC_DBOX_1
0.0556
Drug responses associated with CCDC89 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRSQLQTLK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N998
Coiled-coil domain-containing protein 89
DEG_APCC_DBOX_1
229:237
LRSQLQTLK
APC,CDC20,FZR1
0.8836
More...