DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRSRLSQLC
Uniprot ID:
Q5VZI3
Source protein:
Transmembrane protein 268
Source gene:
TMEM268
Class:
DEG_APCC_DBOX_1
Location:
225:233
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9058
ASA_SCORE:
74.9444
COIL:
0.4391
CONS_SCORE:
0.7149
DSS_SCORE:
0.2534
HELIX:
0.4579
FCONS_SCORE:
1.3826
RIG_SCORE:
0.7949
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L230F
SIDM00001
Other Blood Cancers
GDSC
LRSRLSQLC
DEG_APCC_DBOX_1
0.6981
p.V236A
SIDM00612
Glioma
GDSC
LRSRLSQLC
DEG_APCC_DBOX_1
0.25
p.V236A
SIDM01622
Breast Carcinoma
GDSC
LRSRLSQLC
DEG_APCC_DBOX_1
0.25
p.E238V
SIDM00234
Other Solid Cancers
GDSC
LRSRLSQLC
DEG_APCC_DBOX_1
0.1944
p.E238V
SIDM00024
Non-Cancerous
GDSC
LRSRLSQLC
DEG_APCC_DBOX_1
0.1944
p.S241N
HD-MY-Z
haematopoietic_and_lymphoid_tissue
COSMIC
LRSRLSQLC
DEG_APCC_DBOX_1
0.1111
p.S242N
SIDM01063
Acute Myeloid Leukemia
GDSC
LRSRLSQLC
DEG_APCC_DBOX_1
0.0833
p.S242N
HD-MY-Z
haematopoietic_and_lymphoid_tissue
COSMIC
LRSRLSQLC
DEG_APCC_DBOX_1
0.0833
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Drug responses associated with TMEM268 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LRSRLSQLC
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VZI3
Transmembrane protein 268
DEG_APCC_DBOX_1
225:233
LRSRLSQLC
APC,CDC20,FZR1
0.9058
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