DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRTPPRE
Uniprot ID:
Q9UQ35
Source protein:
Serine/arginine repetitive matrix protein 2
Source gene:
SRRM2
Class:
DEG_SCF_FBW7_2
Location:
1206:1212
E3 ligase:
FBXW7
DEGRON score:
0.9917
ASA_SCORE:
126.0143
COIL:
0.9757
CONS_SCORE:
0.408
DSS_SCORE:
0.7429
HELIX:
0.0166
FCONS_SCORE:
1.0666
RIG_SCORE:
0.6414
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1208S
TCGA-2Y-A9GY
LIHC
TCGA
LRTPPRE
DEG_SCF_FBW7_2
0.8227
p.T1208S
DO219515
LIHC
ICGC
LRTPPRE
DEG_SCF_FBW7_2
0.8227
p.L1200M
TCGA-91-6835
LUAD
TCGA
LRTPPRE
DEG_SCF_FBW7_2
0.1667
p.L1200M
DO26082
LUAD
ICGC
LRTPPRE
DEG_SCF_FBW7_2
0.1667
p.E1212Q
TCGA-CN-4723
HNSC
TCGA
LRTPPRE
DEG_SCF_FBW7_2
0.6744
p.E1212Q
DO14830
HNSC
ICGC
LRTPPRE
DEG_SCF_FBW7_2
0.6744
p.R1207S
TCGA-DD-AAEK
LIHC
TCGA
LRTPPRE
DEG_SCF_FBW7_2
0.6316
p.R1207S
DO52273
LIHC
ICGC
LRTPPRE
DEG_SCF_FBW7_2
0.6316
p.S1199L
DO225266
BRCA
ICGC
LRTPPRE
DEG_SCF_FBW7_2
0.5833
p.G1217V
SIDM00719
Small Cell Lung Carcinoma
GDSC
LRTPPRE
DEG_SCF_FBW7_2
0.1944
p.G1217V
ACH-001364
Lung Cancer
CCLE
LRTPPRE
DEG_SCF_FBW7_2
0.1944
p.G1217V
NCI-H345
lung
COSMIC
LRTPPRE
DEG_SCF_FBW7_2
0.1944
Drug responses associated with SRRM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRTPPRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UQ35
Serine/arginine repetitive matrix protein 2
DEG_SCF_FBW7_2
1206:1212
LRTPPRE
FBXW7
0.9917
More...