DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRVALATVY
Uniprot ID:
Q96L12
Source protein:
Calreticulin-3
Source gene:
CALR3
Class:
DEG_APCC_DBOX_1
Location:
14:22
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7245
ASA_SCORE:
63.3889
COIL:
0.5718
CONS_SCORE:
0.6329
DSS_SCORE:
0.0024
HELIX:
0.2912
FCONS_SCORE:
1.3441
RIG_SCORE:
0.989
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F27C
TCGA-EO-A3AV
UCEC
TCGA
LRVALATVY
DEG_APCC_DBOX_1
0.1944
p.F27C
DO52412
UCEC
ICGC
LRVALATVY
DEG_APCC_DBOX_1
0.1944
p.E25Q
TCGA-Q9-A6FW
ESCA
TCGA
LRVALATVY
DEG_APCC_DBOX_1
0.25
p.G30R
DO233233
GACA
ICGC
LRVALATVY
DEG_APCC_DBOX_1
0.1111
p.V6G
DO233764
GACA
ICGC
LRVALATVY
DEG_APCC_DBOX_1
0.1111
p.C12R
DO227933
PBCA
ICGC
LRVALATVY
DEG_APCC_DBOX_1
0.2778
p.M13V
SIDM01246
Ewing's Sarcoma
GDSC
LRVALATVY
DEG_APCC_DBOX_1
0.3056
p.M13V
SIDM00634
Ewing's Sarcoma
GDSC
LRVALATVY
DEG_APCC_DBOX_1
0.3056
p.M13V
ACH-002160
Bone Cancer
CCLE
LRVALATVY
DEG_APCC_DBOX_1
0.3056
p.M13V
MC-IXC
autonomic_ganglia
COSMIC
LRVALATVY
DEG_APCC_DBOX_1
0.3056
p.A10T
SIDM01559
Melanoma
GDSC
LRVALATVY
DEG_APCC_DBOX_1
0.2222
p.A10T
ACH-000296
Colon/Colorectal Cancer
CCLE
LRVALATVY
DEG_APCC_DBOX_1
0.2222
Drug responses associated with CALR3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRVALATVY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96L12
Calreticulin-3
DEG_APCC_DBOX_1
14:22
LRVALATVY
APC,CDC20,FZR1
0.7245
More...