DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRVGLLKMR
Uniprot ID:
Q8N3Z0
Source protein:
Inactive serine protease 35
Source gene:
PRSS35
Class:
DEG_APCC_DBOX_1
Location:
184:192
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.663
ASA_SCORE:
49.1667
COIL:
0.422
CONS_SCORE:
0.5535
DSS_SCORE:
0.5939
HELIX:
0.0386
FCONS_SCORE:
1.0432
RIG_SCORE:
0.801
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K190N
TCGA-05-4410
LUAD
TCGA
LRVGLLKMR
DEG_APCC_DBOX_1
0.5806
p.K190N
DO25426
LUAD
ICGC
LRVGLLKMR
DEG_APCC_DBOX_1
0.5806
p.V178A
TCGA-06-5416
GBM
TCGA
LRVGLLKMR
DEG_APCC_DBOX_1
0.1667
p.V178A
DO10880
GBM
ICGC
LRVGLLKMR
DEG_APCC_DBOX_1
0.1667
p.S195R
TCGA-34-2609
LUSC
TCGA
LRVGLLKMR
DEG_APCC_DBOX_1
0.25
p.S195R
TCGA-EO-A22R
UCEC
TCGA
LRVGLLKMR
DEG_APCC_DBOX_1
0.25
p.S195R
TCGA-LN-A49Y
ESCA
TCGA
LRVGLLKMR
DEG_APCC_DBOX_1
0.25
p.S195R
DO26981
LUSC
ICGC
LRVGLLKMR
DEG_APCC_DBOX_1
0.25
p.S195R
DO42713
UCEC
ICGC
LRVGLLKMR
DEG_APCC_DBOX_1
0.25
p.K175N
TCGA-AG-A002
READ
TCGA
LRVGLLKMR
DEG_APCC_DBOX_1
0.1944
p.K194T
TCGA-AJ-A3EL
UCEC
TCGA
LRVGLLKMR
DEG_APCC_DBOX_1
0.2778
p.K194T
DO41542
UCEC
ICGC
LRVGLLKMR
DEG_APCC_DBOX_1
0.2778
p.R185S
TCGA-E6-A1LX
UCEC
TCGA
LRVGLLKMR
DEG_APCC_DBOX_1
0.7427
p.R185S
DO41020
UCEC
ICGC
LRVGLLKMR
DEG_APCC_DBOX_1
0.7427
p.R185S
ACH-002044
Head and Neck Cancer
CCLE
LRVGLLKMR
DEG_APCC_DBOX_1
0.7427
p.G174V
DO229028
LICA
ICGC
LRVGLLKMR
DEG_APCC_DBOX_1
0.0556
p.L189F
DO229031
LICA
ICGC
LRVGLLKMR
DEG_APCC_DBOX_1
0.587
p.R200H
SIDM02015
Colorectal Carcinoma
GDSC
LRVGLLKMR
DEG_APCC_DBOX_1
0.1111
Drug responses associated with PRSS35 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRVGLLKMR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N3Z0
Inactive serine protease 35
DEG_APCC_DBOX_1
184:192
LRVGLLKMR
APC,CDC20,FZR1
0.663
More...