DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRVRLPSVG
Uniprot ID:
Q9BXM0
Source protein:
Periaxin
Source gene:
PRX
Class:
DEG_APCC_DBOX_1
Location:
1433:1441
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9351
ASA_SCORE:
58.7
COIL:
0.4712
CONS_SCORE:
0.8558
DSS_SCORE:
0.5735
HELIX:
0.0154
FCONS_SCORE:
1.0011
RIG_SCORE:
0.7092
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1434W
TCGA-AM-5821
COAD
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.8634
p.R1434W
DO8240
COAD
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.8634
p.R1436W
TCGA-BR-8285
STAD
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.7523
p.R1436W
DO38479
STAD
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.7523
p.R1434Q
TCGA-AX-A3G9
UCEC
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.7329
p.R1434Q
DO41241
UCEC
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.7329
p.R1436Q
SIDM00078
Oral Cavity Carcinoma
GDSC
LRVRLPSVG
DEG_APCC_DBOX_1
0.6218
p.R1436Q
ACH-000228
Head and Neck Cancer
CCLE
LRVRLPSVG
DEG_APCC_DBOX_1
0.6218
p.R1436Q
BICR31
upper_aerodigestive_tract
COSMIC
LRVRLPSVG
DEG_APCC_DBOX_1
0.6218
p.P1438S
TCGA-DK-A6AW
BLCA
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.5641
p.P1438S
DO48566
BLCA
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.5641
p.P1450L
TCGA-37-A5EL
LUSC
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.0833
p.P1450L
DO223718
LUSC
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.0833
p.P1450Q
TCGA-D6-8568
HNSC
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.0833
p.P1450Q
DO14388
HNSC
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.0833
p.G1424W
DO46374
OV
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.0833
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Drug responses associated with PRX mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LRVRLPSVG
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BXM0
Periaxin
DEG_APCC_DBOX_1
1433:1441
LRVRLPSVG
APC,CDC20,FZR1
0.9351
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