DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRVRLPSVG
Uniprot ID:
Q9BXM0
Source protein:
Periaxin
Source gene:
PRX
Class:
DEG_APCC_DBOX_1
Location:
1433:1441
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9351
ASA_SCORE:
58.7
COIL:
0.4712
CONS_SCORE:
0.8558
DSS_SCORE:
0.5735
HELIX:
0.0154
FCONS_SCORE:
1.0011
RIG_SCORE:
0.7092
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1450L
TCGA-37-A5EL
LUSC
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.0833
p.P1450L
DO223718
LUSC
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.0833
p.R1434W
TCGA-AM-5821
COAD
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.8634
p.R1434W
DO8240
COAD
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.8634
p.R1434Q
TCGA-AX-A3G9
UCEC
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.7329
p.R1434Q
DO41241
UCEC
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.7329
p.R1436W
TCGA-BR-8285
STAD
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.7523
p.R1436W
DO38479
STAD
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.7523
p.P1450Q
TCGA-D6-8568
HNSC
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.0833
p.P1450Q
DO14388
HNSC
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.0833
p.P1438S
TCGA-DK-A6AW
BLCA
TCGA
LRVRLPSVG
DEG_APCC_DBOX_1
0.5641
p.P1438S
DO48566
BLCA
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.5641
p.G1424W
DO46374
OV
ICGC
LRVRLPSVG
DEG_APCC_DBOX_1
0.0833
p.R1436Q
SIDM00078
Oral Cavity Carcinoma
GDSC
LRVRLPSVG
DEG_APCC_DBOX_1
0.6218
p.R1436Q
ACH-000228
Head and Neck Cancer
CCLE
LRVRLPSVG
DEG_APCC_DBOX_1
0.6218
p.R1436Q
BICR31
upper_aerodigestive_tract
COSMIC
LRVRLPSVG
DEG_APCC_DBOX_1
0.6218
Drug responses associated with PRX mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRVRLPSVG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BXM0
Periaxin
DEG_APCC_DBOX_1
1433:1441
LRVRLPSVG
APC,CDC20,FZR1
0.9351
More...