DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRVYSD
Uniprot ID:
Q5VSG8
Source protein:
Glycoprotein endo-alpha-1,2-mannosidase-like protein
Source gene:
MANEAL
Class:
LIG_APCC_ABBA_1
Location:
99:104
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7812
ASA_SCORE:
71.9
COIL:
0.7357
CONS_SCORE:
0.3566
DSS_SCORE:
0.1581
HELIX:
0.0653
FCONS_SCORE:
0.7357
RIG_SCORE:
0.808
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H106Y
TCGA-AZ-6598
COAD
TCGA
LRVYSD
LIG_APCC_ABBA_1
0.2778
p.H106Y
DO10276
COAD
ICGC
LRVYSD
LIG_APCC_ABBA_1
0.2778
p.G114W
TCGA-CQ-6223
HNSC
TCGA
LRVYSD
LIG_APCC_ABBA_1
0.0556
p.G114W
DO15318
HNSC
ICGC
LRVYSD
LIG_APCC_ABBA_1
0.0556
p.Y110C
DO231515
LINC
ICGC
LRVYSD
LIG_APCC_ABBA_1
0.1667
p.S111L
DO219871
SKCA
ICGC
LRVYSD
LIG_APCC_ABBA_1
0.1389
p.V101I
SIDM00217
Colorectal Carcinoma
GDSC
LRVYSD
LIG_APCC_ABBA_1
0.5965
p.G94R
BHY
upper_aerodigestive_tract
COSMIC
LRVYSD
LIG_APCC_ABBA_1
0.1944
p.T101M
SK-UT-1
soft_tissue
COSMIC
LRVYSD
LIG_APCC_ABBA_1
0.7423
p.A95T
SNU-1040
large_intestine
COSMIC
LRVYSD
LIG_APCC_ABBA_1
0.2222
Drug responses associated with MANEAL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRVYSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VSG8
Glycoprotein endo-alpha-1,2-mannosidase-like protein
LIG_APCC_ABBA_1
99:104
LRVYSD
APC,CDC20,FZR1
0.7812
More...