DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRVYSE
Uniprot ID:
Q9BYK8
Source protein:
Helicase with zinc finger domain 2
Source gene:
HELZ2
Class:
LIG_APCC_ABBA_1
Location:
2242:2247
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5068
ASA_SCORE:
64.65
COIL:
0.399
CONS_SCORE:
0.7659
DSS_SCORE:
0.2404
HELIX:
0.258
FCONS_SCORE:
1.3196
RIG_SCORE:
0.7897
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R2243H
TCGA-B5-A11E
UCEC
TCGA
LRVYSE
LIG_APCC_ABBA_1
0.7133
p.M2237V
SIDM01728
Endometrial Carcinoma
GDSC
LRVYSE
LIG_APCC_ABBA_1
0.1944
p.M2237V
ACH-000173
Endometrial/Uterine Cancer
CCLE
LRVYSE
LIG_APCC_ABBA_1
0.1944
p.R2236M
TCGA-EO-A22R
UCEC
TCGA
LRVYSE
LIG_APCC_ABBA_1
0.1667
p.R2235G
TCGA-B9-4113
KIRP
TCGA
LRVYSE
LIG_APCC_ABBA_1
0.1389
p.R2235K
ACH-000338
Lymphoma
CCLE
LRVYSE
LIG_APCC_ABBA_1
0.1389
p.V2256M
SIDM00393
Gastric Carcinoma
GDSC
LRVYSE
LIG_APCC_ABBA_1
0.0833
p.V2256M
ACH-001653
Gastric Cancer
CCLE
LRVYSE
LIG_APCC_ABBA_1
0.0833
p.V2256M
SK-GT-2
stomach
COSMIC
LRVYSE
LIG_APCC_ABBA_1
0.0833
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Drug responses associated with HELZ2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of LRVYSE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BYK8
Helicase with zinc finger domain 2
LIG_APCC_ABBA_1
2242:2247
LRVYSE
APC,CDC20,FZR1
0.5068
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