DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRVYYD
Uniprot ID:
Q9Y2K9
Source protein:
Syntaxin-binding protein 5-like
Source gene:
STXBP5L
Class:
LIG_APCC_ABBA_1
Location:
245:250
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5651
ASA_SCORE:
58.1667
COIL:
0.3308
CONS_SCORE:
0.3276
DSS_SCORE:
0.0572
HELIX:
0.0025
FCONS_SCORE:
0.7352
RIG_SCORE:
0.9024
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A252T
TCGA-37-3792
LUSC
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.2778
p.A252T
DO27192
LUSC
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.2778
p.E251D
TCGA-78-7536
LUAD
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.3056
p.E251D
DO26414
LUAD
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.3056
p.E251K
TCGA-95-7039
LUAD
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.3056
p.E251K
TCGA-W3-AA1V
SKCM
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.3056
p.E251K
DO23907
LUAD
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.3056
p.E251K
DO51276
SKCM
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.3056
p.H260N
TCGA-AA-A010
COAD
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.0556
p.H260N
DO233249
GACA
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.0556
p.S255L
TCGA-BF-A1Q0
SKCM
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.1944
p.S255L
DO47374
SKCM
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.1944
p.H260R
TCGA-D1-A2G5
UCEC
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.0556
p.H260R
DO40918
UCEC
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.0556
p.R246S
TCGA-DK-A6AW
BLCA
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.6316
p.R246S
DO48566
BLCA
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.6316
p.H260Y
TCGA-ER-A42L
SKCM
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.0556
p.H260Y
DO223910
SKCM
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.0556
p.W236C
TCGA-FD-A6TB
BLCA
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.0833
p.W236C
DO51879
BLCA
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.0833
p.D237G
TCGA-HU-A4H0
STAD
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.1111
p.D237G
DO47785
STAD
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.1111
p.L238F
TCGA-KQ-A41N
BLCA
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.1389
p.L238F
DO223588
BLCA
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.1389
p.E251V
TCGA-L9-A7SV
LUAD
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.3056
p.E251V
DO49875
LUAD
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.3056
p.V247F
TCGA-XK-AAIW
PRAD
TCGA
LRVYYD
LIG_APCC_ABBA_1
0.7068
p.V247F
DO51407
PRAD
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.7068
p.S240Y
DO229213
THCA
ICGC
LRVYYD
LIG_APCC_ABBA_1
0.1944
p.V247I
SIDM00041
Gastric Carcinoma
GDSC
LRVYYD
LIG_APCC_ABBA_1
0.5965
p.V247I
ACH-002306
Gastric Cancer
CCLE
LRVYYD
LIG_APCC_ABBA_1
0.5965
p.V247I
STS-0421
soft_tissue
COSMIC
LRVYYD
LIG_APCC_ABBA_1
0.5965
p.D237E
SIDM01986
Non-Small Cell Lung Carcinoma
GDSC
LRVYYD
LIG_APCC_ABBA_1
0.1111
p.D237E
SIDM00903
Non-Small Cell Lung Carcinoma
GDSC
LRVYYD
LIG_APCC_ABBA_1
0.1111
p.D237E
SIDM00902
Non-Small Cell Lung Carcinoma
GDSC
LRVYYD
LIG_APCC_ABBA_1
0.1111
p.D237E
ACH-000681
Lung Cancer
CCLE
LRVYYD
LIG_APCC_ABBA_1
0.1111
p.D237E
ACH-002337
Lung Cancer
CCLE
LRVYYD
LIG_APCC_ABBA_1
0.1111
p.D237E
A549
lung
COSMIC
LRVYYD
LIG_APCC_ABBA_1
0.1111
p.I253V
ACH-002016
Eye Cancer
CCLE
LRVYYD
LIG_APCC_ABBA_1
0.25
Drug responses associated with STXBP5L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRVYYD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y2K9
Syntaxin-binding protein 5-like
LIG_APCC_ABBA_1
245:250
LRVYYD
APC,CDC20,FZR1
0.5651
More...