DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSDTPTSS
Uniprot ID:
O95359
Source protein:
Transforming acidic coiled-coil-containing protein 2
Source gene:
TACC2
Class:
DEG_SCF_FBW7_1
Location:
910:917
E3 ligase:
FBXW7
DEGRON score:
0.949
ASA_SCORE:
89.85
COIL:
0.9511
CONS_SCORE:
0.4205
DSS_SCORE:
0.7052
HELIX:
0.0185
FCONS_SCORE:
1.1279
RIG_SCORE:
0.5985
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.W923C
TCGA-13-2061
OV
TCGA
LSDTPTSS
DEG_SCF_FBW7_1
0.1667
p.W923C
DO27970
OV
ICGC
LSDTPTSS
DEG_SCF_FBW7_1
0.1667
p.Q904E
TCGA-55-8204
LUAD
TCGA
LSDTPTSS
DEG_SCF_FBW7_1
0.1667
p.Q904E
DO45322
LUAD
ICGC
LSDTPTSS
DEG_SCF_FBW7_1
0.1667
p.S926Y
TCGA-B5-A11E
UCEC
TCGA
LSDTPTSS
DEG_SCF_FBW7_1
0.0833
p.S926Y
DO41644
UCEC
ICGC
LSDTPTSS
DEG_SCF_FBW7_1
0.0833
p.Q904H
TCGA-DD-A4NH
LIHC
TCGA
LSDTPTSS
DEG_SCF_FBW7_1
0.1667
p.Q904H
DO44907
LIHC
ICGC
LSDTPTSS
DEG_SCF_FBW7_1
0.1667
p.P918T
TCGA-EE-A2MG
SKCM
TCGA
LSDTPTSS
DEG_SCF_FBW7_1
0.3056
p.P918T
DO37421
SKCM
ICGC
LSDTPTSS
DEG_SCF_FBW7_1
0.3056
p.G908S
TCGA-FS-A1ZZ
SKCM
TCGA
LSDTPTSS
DEG_SCF_FBW7_1
0.2778
p.G908S
DO37412
SKCM
ICGC
LSDTPTSS
DEG_SCF_FBW7_1
0.2778
p.S925I
TCGA-KK-A8IG
PRAD
TCGA
LSDTPTSS
DEG_SCF_FBW7_1
0.1111
p.S925I
DO219331
PRAD
ICGC
LSDTPTSS
DEG_SCF_FBW7_1
0.1111
p.L910M
DO229389
BTCA
ICGC
LSDTPTSS
DEG_SCF_FBW7_1
0.5999
p.D914N
DO220862
MELA
ICGC
LSDTPTSS
DEG_SCF_FBW7_1
0.6932
p.D914N
DO37839
SKCM
ICGC
LSDTPTSS
DEG_SCF_FBW7_1
0.6932
p.G908C
DO232352
PBCA
ICGC
LSDTPTSS
DEG_SCF_FBW7_1
0.2778
p.T906A
SNU-1040
large_intestine
COSMIC
LSDTPTSS
DEG_SCF_FBW7_1
0.2222
p.K917R
MEL-HO
skin
COSMIC
LSDTPTSS
DEG_SCF_FBW7_1
0.7237
p.K905E
L-1236
haematopoietic_and_lymphoid_tissue
COSMIC
LSDTPTSS
DEG_SCF_FBW7_1
0.1944
p.K917E
L-1236
haematopoietic_and_lymphoid_tissue
COSMIC
LSDTPTSS
DEG_SCF_FBW7_1
0.7022
p.E909Q
NTERA-2_cl_D1
testis
COSMIC
LSDTPTSS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with TACC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSDTPTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95359
Transforming acidic coiled-coil-containing protein 2
DEG_SCF_FBW7_1
910:917
LSDTPTSS
FBXW7
0.949
More...