DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSFTPADS
Uniprot ID:
Q8IXL7
Source protein:
Methionine-R-sulfoxide reductase B3
Source gene:
MSRB3
Class:
DEG_SCF_FBW7_1
Location:
164:171
E3 ligase:
FBXW7
DEGRON score:
0.5767
ASA_SCORE:
57.525
COIL:
0.3969
CONS_SCORE:
0.5557
DSS_SCORE:
0.3762
HELIX:
0.0236
FCONS_SCORE:
0.9925
RIG_SCORE:
0.704
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G178D
TCGA-4Z-AA89
BLCA
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.1389
p.G178D
TCGA-PK-A5HB
ACC
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.1389
p.G178D
DO218991
BLCA
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.1389
p.P168A
TCGA-56-A62T
LUSC
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.7503
p.P168A
DO219144
LUSC
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.7503
p.S161L
TCGA-A6-2675
COAD
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.25
p.S161L
TCGA-AA-A00N
COAD
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.25
p.S161L
TCGA-BR-8680
STAD
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.25
p.S161L
TCGA-HZ-A4BH
PAAD
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.25
p.S161L
DO9876
COAD
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.25
p.S161L
DO8594
COAD
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.25
p.S161L
DO32814
PAAD
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.25
p.S161L
DO47769
STAD
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.25
p.S161L
SIDM01611
Endometrial Carcinoma
GDSC
LSFTPADS
DEG_SCF_FBW7_1
0.25
p.R156I
TCGA-B5-A0JY
UCEC
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.1111
p.R156I
DO43041
UCEC
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.1111
p.R156G
TCGA-CA-6717
COAD
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.1111
p.R156G
DO8264
COAD
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.1111
p.A175T
TCGA-CM-6168
COAD
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.2222
p.A175T
TCGA-EY-A215
UCEC
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.2222
p.A175T
DO9602
COAD
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.2222
p.A175T
DO42665
UCEC
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.2222
p.T174I
TCGA-D3-A5GO
SKCM
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.25
p.T174I
DO47419
SKCM
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.25
p.E176K
TCGA-FU-A3NI
CESC
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.1944
p.E176K
DO6293
CESC
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.1944
p.R156K
TCGA-W3-AA1R
SKCM
TCGA
LSFTPADS
DEG_SCF_FBW7_1
0.1111
p.R156K
DO51275
SKCM
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.1111
p.R156S
DO18164
KIRC
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.1111
p.S171C
DO25104
LUAD
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.7541
p.G173A
DO46342
OV
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.2778
p.G154S
DO32843
PACA
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.0556
p.G154R
DO218850
SKCA
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.0556
p.G154E
DO218850
SKCA
ICGC
LSFTPADS
DEG_SCF_FBW7_1
0.0556
p.Y172C
SIDM00345
Non-Small Cell Lung Carcinoma
GDSC
LSFTPADS
DEG_SCF_FBW7_1
0.3056
p.A175D
ACH-000861
Lung Cancer
CCLE
LSFTPADS
DEG_SCF_FBW7_1
0.2222
p.A175D
HOP-62
lung
COSMIC
LSFTPADS
DEG_SCF_FBW7_1
0.2222
p.S154L
ACH-000996
Endometrial/Uterine Cancer
CCLE
LSFTPADS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with MSRB3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSFTPADS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IXL7
Methionine-R-sulfoxide reductase B3
DEG_SCF_FBW7_1
164:171
LSFTPADS
FBXW7
0.5767
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