DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSGTPLVS
Uniprot ID:
Q03692
Source protein:
Collagen alpha-1
Source gene:
COL10A1
Class:
DEG_SCF_FBW7_1
Location:
534:541
E3 ligase:
FBXW7
DEGRON score:
0.9877
ASA_SCORE:
66.7125
COIL:
0.9053
CONS_SCORE:
0.398
DSS_SCORE:
0.4865
HELIX:
0.0189
FCONS_SCORE:
0.8493
RIG_SCORE:
0.6966
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P538S
TCGA-AJ-A3BH
UCEC
TCGA
LSGTPLVS
DEG_SCF_FBW7_1
0.6752
p.P538S
DO41638
UCEC
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.6752
p.G545R
DO230334
COCA
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2222
p.G545R
DO229010
COCA
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2222
p.G545R
DO229016
COCA
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2222
p.G545R
DO229003
COCA
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2222
p.G545R
DO229005
COCA
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2222
p.G545R
DO229473
LAML
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2222
p.G545R
DO229505
LAML
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2222
p.G545R
DO230659
LAML
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2222
p.G545R
DO231140
LAML
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2222
p.G545R
DO229047
LICA
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2222
p.G545R
DO230990
LUSC
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2222
p.F525S
DO227987
COCA
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.0833
p.N543K
DO229034
LICA
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.2778
p.P550L
DO229050
LICA
ICGC
LSGTPLVS
DEG_SCF_FBW7_1
0.0833
p.S533R
SIDM00313
Hodgkin's Lymphoma
GDSC
LSGTPLVS
DEG_SCF_FBW7_1
0.3056
p.S533R
ACH-000702
Lymphoma
CCLE
LSGTPLVS
DEG_SCF_FBW7_1
0.3056
p.S533R
L-1236
haematopoietic_and_lymphoid_tissue
COSMIC
LSGTPLVS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with COL10A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSGTPLVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q03692
Collagen alpha-1
DEG_SCF_FBW7_1
534:541
LSGTPLVS
FBXW7
0.9877
More...