DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSIHSD
Uniprot ID:
P15822
Source protein:
Zinc finger protein 40
Source gene:
HIVEP1
Class:
LIG_APCC_ABBA_1
Location:
483:488
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9397
ASA_SCORE:
79.7333
COIL:
0.5752
CONS_SCORE:
0.2407
DSS_SCORE:
0.641
HELIX:
0.0267
FCONS_SCORE:
0.6899
RIG_SCORE:
0.6639
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V489I
TCGA-32-2494
GBM
TCGA
LSIHSD
LIG_APCC_ABBA_1
0.3056
p.V489I
DO11998
GBM
ICGC
LSIHSD
LIG_APCC_ABBA_1
0.3056
p.L473V
TCGA-AA-A00N
COAD
TCGA
LSIHSD
LIG_APCC_ABBA_1
0.0556
p.L473V
DO9876
COAD
ICGC
LSIHSD
LIG_APCC_ABBA_1
0.0556
p.S492C
TCGA-D5-6932
COAD
TCGA
LSIHSD
LIG_APCC_ABBA_1
0.6667
p.S492C
DO9378
COAD
ICGC
LSIHSD
LIG_APCC_ABBA_1
0.6667
p.K481T
TCGA-QF-A5YS
UCEC
TCGA
LSIHSD
LIG_APCC_ABBA_1
0.2778
p.K481T
DO52426
UCEC
ICGC
LSIHSD
LIG_APCC_ABBA_1
0.2778
p.G493V
DO228952
LICA
ICGC
LSIHSD
LIG_APCC_ABBA_1
0.1944
p.G493V
DO229027
LICA
ICGC
LSIHSD
LIG_APCC_ABBA_1
0.1944
p.P480R
DO230918
LUSC
ICGC
LSIHSD
LIG_APCC_ABBA_1
0.25
p.P480R
DO224546
LUSC
ICGC
LSIHSD
LIG_APCC_ABBA_1
0.25
p.L473F
DO46372
OV
ICGC
LSIHSD
LIG_APCC_ABBA_1
0.0556
p.R473Q
NCI-H1793
lung
COSMIC
LSIHSD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with HIVEP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSIHSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P15822
Zinc finger protein 40
LIG_APCC_ABBA_1
483:488
LSIHSD
APC,CDC20,FZR1
0.9397
More...