DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSIYGD
Uniprot ID:
Q9BXS4
Source protein:
Transmembrane protein 59
Source gene:
TMEM59
Class:
LIG_APCC_ABBA_1
Location:
274:279
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8038
ASA_SCORE:
57.4833
COIL:
0.7518
CONS_SCORE:
0.7026
DSS_SCORE:
0.1123
HELIX:
0.146
FCONS_SCORE:
1.4201
RIG_SCORE:
0.8744
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S271Y
TCGA-80-5608
LUAD
TCGA
LSIYGD
LIG_APCC_ABBA_1
0.25
p.S271Y
DO23693
LUAD
ICGC
LSIYGD
LIG_APCC_ABBA_1
0.25
p.A264S
TCGA-AP-A051
UCEC
TCGA
LSIYGD
LIG_APCC_ABBA_1
0.0556
p.A264S
DO42673
UCEC
ICGC
LSIYGD
LIG_APCC_ABBA_1
0.0556
p.M283I
TCGA-AX-A0J0
UCEC
TCGA
LSIYGD
LIG_APCC_ABBA_1
0.2222
p.M283I
DO41133
UCEC
ICGC
LSIYGD
LIG_APCC_ABBA_1
0.2222
p.M283I
SIDM00588
Oral Cavity Carcinoma
GDSC
LSIYGD
LIG_APCC_ABBA_1
0.2222
p.M283I
ACH-000546
Head and Neck Cancer
CCLE
LSIYGD
LIG_APCC_ABBA_1
0.2222
p.M283I
HSC-4
upper_aerodigestive_tract
COSMIC
LSIYGD
LIG_APCC_ABBA_1
0.2222
p.A264V
TCGA-B5-A1MX
UCEC
TCGA
LSIYGD
LIG_APCC_ABBA_1
0.0556
p.A264V
DO41999
UCEC
ICGC
LSIYGD
LIG_APCC_ABBA_1
0.0556
p.Y277C
DO222919
BTCA
ICGC
LSIYGD
LIG_APCC_ABBA_1
0.8198
p.A264D
DO229029
LICA
ICGC
LSIYGD
LIG_APCC_ABBA_1
0.0556
p.N289K
DO229036
LICA
ICGC
LSIYGD
LIG_APCC_ABBA_1
0.0556
p.L274Q
DO46546
OV
ICGC
LSIYGD
LIG_APCC_ABBA_1
0.7765
p.G278S
DO229208
THCA
ICGC
LSIYGD
LIG_APCC_ABBA_1
0.5882
p.G278R
SIDM00844
Burkitt's Lymphoma
GDSC
LSIYGD
LIG_APCC_ABBA_1
0.6457
p.G278R
ACH-000654
Lymphoma
CCLE
LSIYGD
LIG_APCC_ABBA_1
0.6457
p.G278R
Raji
haematopoietic_and_lymphoid_tissue
COSMIC
LSIYGD
LIG_APCC_ABBA_1
0.6457
Drug responses associated with TMEM59 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSIYGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BXS4
Transmembrane protein 59
LIG_APCC_ABBA_1
274:279
LSIYGD
APC,CDC20,FZR1
0.8038
More...