DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSLHAE
Uniprot ID:
Q9H7N4
Source protein:
Splicing factor, arginine/serine-rich 19
Source gene:
SCAF1
Class:
LIG_APCC_ABBA_1
Location:
447:452
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8297
ASA_SCORE:
86.2
COIL:
0.7132
CONS_SCORE:
0.4854
DSS_SCORE:
0.7703
HELIX:
0.23
FCONS_SCORE:
0.9856
RIG_SCORE:
0.6708
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E442K
DO46384
OV
ICGC
LSLHAE
LIG_APCC_ABBA_1
0.1944
p.S448F
DO218855
SKCA
ICGC
LSLHAE
LIG_APCC_ABBA_1
0.7982
p.D444G
SIDM02026
Colorectal Carcinoma
GDSC
LSLHAE
LIG_APCC_ABBA_1
0.25
p.A458T
ACH-000973
Bladder Cancer
CCLE
LSLHAE
LIG_APCC_ABBA_1
0.1667
p.E452Q
ACH-001402
Cervical Cancer
CCLE
LSLHAE
LIG_APCC_ABBA_1
0.6744
p.S453P
ACH-001735
Leukemia
CCLE
LSLHAE
LIG_APCC_ABBA_1
0.75
Drug responses associated with SCAF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSLHAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H7N4
Splicing factor, arginine/serine-rich 19
LIG_APCC_ABBA_1
447:452
LSLHAE
APC,CDC20,FZR1
0.8297
More...