DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LSLHLE
Uniprot ID:
Q96S07
Source protein:
Proline-rich protein 25
Source gene:
PRR25
Class:
LIG_APCC_ABBA_1
Location:
195:200
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6308
ASA_SCORE:
58.4833
COIL:
0.4037
CONS_SCORE:
0.9001
DSS_SCORE:
0.6094
HELIX:
0.145
FCONS_SCORE:
1.0448
RIG_SCORE:
0.7414
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L195M
TCGA-55-8511
LUAD
TCGA
LSLHLE
LIG_APCC_ABBA_1
0.5999
p.L195M
DO24940
LUAD
ICGC
LSLHLE
LIG_APCC_ABBA_1
0.5999
p.P189T
TCGA-85-A50Z
LUSC
TCGA
LSLHLE
LIG_APCC_ABBA_1
0.1667
p.P189T
DO45462
LUSC
ICGC
LSLHLE
LIG_APCC_ABBA_1
0.1667
p.L199F
TCGA-EJ-7330
PRAD
TCGA
LSLHLE
LIG_APCC_ABBA_1
0.587
p.L199F
DO36237
PRAD
ICGC
LSLHLE
LIG_APCC_ABBA_1
0.587
p.R208H
TCGA-HJ-7597
STAD
TCGA
LSLHLE
LIG_APCC_ABBA_1
0.1111
p.R208H
DO38195
STAD
ICGC
LSLHLE
LIG_APCC_ABBA_1
0.1111
p.G204C
DO228948
LICA
ICGC
LSLHLE
LIG_APCC_ABBA_1
0.2222
p.L194P
DO50774
LIRI
ICGC
LSLHLE
LIG_APCC_ABBA_1
0.3056
p.R208C
DO35242
PACA
ICGC
LSLHLE
LIG_APCC_ABBA_1
0.1111
p.K201R
DO219872
SKCA
ICGC
LSLHLE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with PRR25 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSLHLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96S07
Proline-rich protein 25
LIG_APCC_ABBA_1
195:200
LSLHLE
APC,CDC20,FZR1
0.6308
More...