DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LSLHSE
Uniprot ID:
Q9NUR3
Source protein:
Transmembrane protein 74B
Source gene:
TMEM74B
Class:
LIG_APCC_ABBA_1
Location:
102:107
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.999
ASA_SCORE:
78.2333
COIL:
0.8365
CONS_SCORE:
0.6106
DSS_SCORE:
0.6289
HELIX:
0.1157
FCONS_SCORE:
1.3121
RIG_SCORE:
0.6503
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S103P
SIDM01611
Endometrial Carcinoma
GDSC
LSLHSE
LIG_APCC_ABBA_1
0.5641
p.S103P
ACH-000996
Endometrial/Uterine Cancer
CCLE
LSLHSE
LIG_APCC_ABBA_1
0.5641
p.D100N
SIDM01228
Melanoma
GDSC
LSLHSE
LIG_APCC_ABBA_1
0.2778
p.D100N
ACH-001024
Skin Cancer
CCLE
LSLHSE
LIG_APCC_ABBA_1
0.2778
p.D100N
CHL-1
skin
COSMIC
LSLHSE
LIG_APCC_ABBA_1
0.2778
p.P110R
SIDM00551
Esophageal Squamous Cell Carcinoma
GDSC
LSLHSE
LIG_APCC_ABBA_1
0.25
p.P110R
ACH-002263
Esophageal Cancer
CCLE
LSLHSE
LIG_APCC_ABBA_1
0.25
p.P110R
KYSE-220
oesophagus
COSMIC
LSLHSE
LIG_APCC_ABBA_1
0.25
p.P114A
SIDM00333
Endometrial Carcinoma
GDSC
LSLHSE
LIG_APCC_ABBA_1
0.1389
p.P114A
ACH-000988
Endometrial/Uterine Cancer
CCLE
LSLHSE
LIG_APCC_ABBA_1
0.1389
p.P114A
MFE-319
endometrium
COSMIC
LSLHSE
LIG_APCC_ABBA_1
0.1389
p.V115M
DO230336
COCA
ICGC
LSLHSE
LIG_APCC_ABBA_1
0.1111
p.V115L
DO230950
LUSC
ICGC
LSLHSE
LIG_APCC_ABBA_1
0.1111
p.V115L
DO224638
LUSC
ICGC
LSLHSE
LIG_APCC_ABBA_1
0.1111
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Drug responses associated with TMEM74B mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LSLHSE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NUR3
Transmembrane protein 74B
LIG_APCC_ABBA_1
102:107
LSLHSE
APC,CDC20,FZR1
0.999
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