DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSLTPRTE
Uniprot ID:
Q9NYK5
Source protein:
39S ribosomal protein L39, mitochondrial
Source gene:
MRPL39
Class:
DEG_SCF_FBW7_2
Location:
56:63
E3 ligase:
FBXW7
DEGRON score:
0.9395
ASA_SCORE:
86.5125
COIL:
0.7863
CONS_SCORE:
0.5817
DSS_SCORE:
0.4598
HELIX:
0.1611
FCONS_SCORE:
1.0393
RIG_SCORE:
0.7337
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T59N
DO233722
GACA
ICGC
LSLTPRTE
DEG_SCF_FBW7_2
0.8166
p.T59P
TCGA-DK-A6AW
BLCA
TCGA
LSLTPRTE
DEG_SCF_FBW7_2
0.8142
p.T59P
DO48566
BLCA
ICGC
LSLTPRTE
DEG_SCF_FBW7_2
0.8142
p.R61G
TCGA-BA-7269
HNSC
TCGA
LSLTPRTE
DEG_SCF_FBW7_2
0.6457
p.R61G
DO14166
HNSC
ICGC
LSLTPRTE
DEG_SCF_FBW7_2
0.6457
p.R61Q
TCGA-AP-A056
UCEC
TCGA
LSLTPRTE
DEG_SCF_FBW7_2
0.6218
p.R61Q
TCGA-BK-A6W3
UCEC
TCGA
LSLTPRTE
DEG_SCF_FBW7_2
0.6218
p.R61Q
TCGA-EO-A3AV
UCEC
TCGA
LSLTPRTE
DEG_SCF_FBW7_2
0.6218
p.R61Q
DO50076
UCEC
ICGC
LSLTPRTE
DEG_SCF_FBW7_2
0.6218
p.R61Q
DO52412
UCEC
ICGC
LSLTPRTE
DEG_SCF_FBW7_2
0.6218
p.R61Q
DO43971
UCEC
ICGC
LSLTPRTE
DEG_SCF_FBW7_2
0.6218
p.R61Q
SIDM01611
Endometrial Carcinoma
GDSC
LSLTPRTE
DEG_SCF_FBW7_2
0.6218
p.R61Q
ACH-000996
Endometrial/Uterine Cancer
CCLE
LSLTPRTE
DEG_SCF_FBW7_2
0.6218
p.Q55K
DO229041
LICA
ICGC
LSLTPRTE
DEG_SCF_FBW7_2
0.3056
p.A53G
TCGA-85-8355
LUSC
TCGA
LSLTPRTE
DEG_SCF_FBW7_2
0.25
p.A53G
DO45488
LUSC
ICGC
LSLTPRTE
DEG_SCF_FBW7_2
0.25
p.G71W
TCGA-09-2044
OV
TCGA
LSLTPRTE
DEG_SCF_FBW7_2
0.1111
p.G71W
DO28923
OV
ICGC
LSLTPRTE
DEG_SCF_FBW7_2
0.1111
p.L47F
SIDM01611
Endometrial Carcinoma
GDSC
LSLTPRTE
DEG_SCF_FBW7_2
0.0833
p.L47F
ACH-000996
Endometrial/Uterine Cancer
CCLE
LSLTPRTE
DEG_SCF_FBW7_2
0.0833
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Drug responses associated with MRPL39 mutations
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Cancer
Mutation (In Degron?)
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Drug
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All proteins holding degron of LSLTPRTE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NYK5
39S ribosomal protein L39, mitochondrial
DEG_SCF_FBW7_2
56:63
LSLTPRTE
FBXW7
0.9395
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