DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSLTPSPE
Uniprot ID:
Q96JE7
Source protein:
Protein transport protein Sec16B
Source gene:
SEC16B
Class:
DEG_SCF_FBW7_2
Location:
956:963
E3 ligase:
FBXW7
DEGRON score:
0.9931
ASA_SCORE:
93.8125
COIL:
0.9571
CONS_SCORE:
0.4426
DSS_SCORE:
0.7808
HELIX:
0.019
FCONS_SCORE:
1.4358
RIG_SCORE:
0.5629
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L967V
TCGA-04-1357
OV
TCGA
LSLTPSPE
DEG_SCF_FBW7_2
0.2222
p.L967V
DO27980
OV
ICGC
LSLTPSPE
DEG_SCF_FBW7_2
0.2222
p.P968L
TCGA-09-1674
OV
TCGA
LSLTPSPE
DEG_SCF_FBW7_2
0.1944
p.P968L
DO31050
OV
ICGC
LSLTPSPE
DEG_SCF_FBW7_2
0.1944
p.H950R
TCGA-B8-5549
KIRC
TCGA
LSLTPSPE
DEG_SCF_FBW7_2
0.1667
p.H950R
DO20446
KIRC
ICGC
LSLTPSPE
DEG_SCF_FBW7_2
0.1667
p.L954M
DO230342
COCA
ICGC
LSLTPSPE
DEG_SCF_FBW7_2
0.2778
p.D969G
DO222846
COCA
ICGC
LSLTPSPE
DEG_SCF_FBW7_2
0.1667
p.G955V
DO233267
GACA
ICGC
LSLTPSPE
DEG_SCF_FBW7_2
0.3056
p.S964Y
DO229036
LICA
ICGC
LSLTPSPE
DEG_SCF_FBW7_2
0.3056
p.G955C
DO25104
LUAD
ICGC
LSLTPSPE
DEG_SCF_FBW7_2
0.3056
p.S957L
DO50657
ORCA
ICGC
LSLTPSPE
DEG_SCF_FBW7_2
0.7667
p.P949S
DO218900
SKCA
ICGC
LSLTPSPE
DEG_SCF_FBW7_2
0.1389
p.G955D
SIDM01293
Colorectal Carcinoma
GDSC
LSLTPSPE
DEG_SCF_FBW7_2
0.3056
p.S947C
SIDM02034
Colorectal Carcinoma
GDSC
LSLTPSPE
DEG_SCF_FBW7_2
0.0833
p.S947T
SIDM00080
Melanoma
GDSC
LSLTPSPE
DEG_SCF_FBW7_2
0.0833
p.S947T
ACH-000730
Skin Cancer
CCLE
LSLTPSPE
DEG_SCF_FBW7_2
0.0833
p.S947T
SK-MEL-5
skin
COSMIC
LSLTPSPE
DEG_SCF_FBW7_2
0.0833
Drug responses associated with SEC16B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSLTPSPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JE7
Protein transport protein Sec16B
DEG_SCF_FBW7_2
956:963
LSLTPSPE
FBXW7
0.9931
More...