DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSLYQD
Uniprot ID:
Q01804
Source protein:
OTU domain-containing protein 4
Source gene:
OTUD4
Class:
LIG_APCC_ABBA_1
Location:
658:663
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9162
ASA_SCORE:
62.3167
COIL:
0.8383
CONS_SCORE:
0.3831
DSS_SCORE:
0.3204
HELIX:
0.087
FCONS_SCORE:
0.7717
RIG_SCORE:
0.7991
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P658S
TCGA-32-2634
GBM
TCGA
LSLYQD
LIG_APCC_ABBA_1
0.6752
p.Y670H
TCGA-AD-A5EJ
COAD
TCGA
LSLYQD
LIG_APCC_ABBA_1
0.1389
p.W650L
TCGA-BF-A1PU
SKCM
TCGA
LSLYQD
LIG_APCC_ABBA_1
0.1111
p.W650L
TCGA-D3-A2JP
SKCM
TCGA
LSLYQD
LIG_APCC_ABBA_1
0.1111
p.L664M
TCGA-MB-A5Y8
SARC
TCGA
LSLYQD
LIG_APCC_ABBA_1
0.3056
p.P650L
DO229054
LICA
ICGC
LSLYQD
LIG_APCC_ABBA_1
0.1111
p.P667S
DO37603
SKCM
ICGC
LSLYQD
LIG_APCC_ABBA_1
0.2222
p.Y655H
SIDM01154
T-Lymphoblastic Leukemia
GDSC
LSLYQD
LIG_APCC_ABBA_1
0.25
p.Y655H
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
LSLYQD
LIG_APCC_ABBA_1
0.25
p.L659V
SIDM00892
Breast Carcinoma
GDSC
LSLYQD
LIG_APCC_ABBA_1
0.6765
p.L659V
BT-483
breast
COSMIC
LSLYQD
LIG_APCC_ABBA_1
0.6765
Drug responses associated with OTUD4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSLYQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q01804
OTU domain-containing protein 4
LIG_APCC_ABBA_1
658:663
LSLYQD
APC,CDC20,FZR1
0.9162
More...