DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSLYTE
Uniprot ID:
Q5JTC6
Source protein:
APC membrane recruitment protein 1
Source gene:
AMER1
Class:
LIG_APCC_ABBA_1
Location:
946:951
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9409
ASA_SCORE:
71.85
COIL:
0.7898
CONS_SCORE:
0.4071
DSS_SCORE:
0.5457
HELIX:
0.0767
FCONS_SCORE:
1.0745
RIG_SCORE:
0.6749
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.W958C
TCGA-BA-6869
HNSC
TCGA
LSLYTE
LIG_APCC_ABBA_1
0.1389
p.W958C
DO14250
HNSC
ICGC
LSLYTE
LIG_APCC_ABBA_1
0.1389
p.R942Q
TCGA-CA-6717
COAD
TCGA
LSLYTE
LIG_APCC_ABBA_1
0.2222
p.R942Q
DO8264
COAD
ICGC
LSLYTE
LIG_APCC_ABBA_1
0.2222
p.W940R
TCGA-D1-A167
UCEC
TCGA
LSLYTE
LIG_APCC_ABBA_1
0.1667
p.W940R
DO40978
UCEC
ICGC
LSLYTE
LIG_APCC_ABBA_1
0.1667
p.S947F
TCGA-D3-A5GO
SKCM
TCGA
LSLYTE
LIG_APCC_ABBA_1
0.6871
p.S947F
DO37474
SKCM
ICGC
LSLYTE
LIG_APCC_ABBA_1
0.6871
p.S947F
DO47419
SKCM
ICGC
LSLYTE
LIG_APCC_ABBA_1
0.6871
p.G938R
TCGA-EE-A2GS
SKCM
TCGA
LSLYTE
LIG_APCC_ABBA_1
0.1111
p.G938R
DO37465
SKCM
ICGC
LSLYTE
LIG_APCC_ABBA_1
0.1111
p.R942L
DO233641
GACA
ICGC
LSLYTE
LIG_APCC_ABBA_1
0.2222
p.G938E
SIDM00251
Gastric Carcinoma
GDSC
LSLYTE
LIG_APCC_ABBA_1
0.1111
p.G938E
ACH-000949
Gastric Cancer
CCLE
LSLYTE
LIG_APCC_ABBA_1
0.1111
p.G938E
TGBC11TKB
stomach
COSMIC
LSLYTE
LIG_APCC_ABBA_1
0.1111
Drug responses associated with AMER1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSLYTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JTC6
APC membrane recruitment protein 1
LIG_APCC_ABBA_1
946:951
LSLYTE
APC,CDC20,FZR1
0.9409
More...