DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LSMFSD
Uniprot ID:
Q9UBY9
Source protein:
Heat shock protein beta-7
Source gene:
HSPB7
Class:
LIG_APCC_ABBA_1
Location:
45:50
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6841
ASA_SCORE:
55.05
COIL:
0.5395
CONS_SCORE:
0.5989
DSS_SCORE:
0.532
HELIX:
0.4372
FCONS_SCORE:
1.0344
RIG_SCORE:
0.7183
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L45M
TCGA-FS-A1ZB
SKCM
TCGA
LSMFSD
LIG_APCC_ABBA_1
0.5999
p.L45M
DO37886
SKCM
ICGC
LSMFSD
LIG_APCC_ABBA_1
0.5999
p.D38N
TCGA-GN-A262
SKCM
TCGA
LSMFSD
LIG_APCC_ABBA_1
0.1389
p.D38N
DO37515
SKCM
ICGC
LSMFSD
LIG_APCC_ABBA_1
0.1389
p.G53D
DO233103
GACA
ICGC
LSMFSD
LIG_APCC_ABBA_1
0.25
p.E42K
DO45225
LIRI
ICGC
LSMFSD
LIG_APCC_ABBA_1
0.25
p.P40S
DO233294
NACA
ICGC
LSMFSD
LIG_APCC_ABBA_1
0.1944
p.D51G
DO232224
PBCA
ICGC
LSMFSD
LIG_APCC_ABBA_1
0.3056
p.D51G
MOLT-16
haematopoietic_and_lymphoid_tissue
COSMIC
LSMFSD
LIG_APCC_ABBA_1
0.3056
p.V53M
DO223286
UCEC
ICGC
LSMFSD
LIG_APCC_ABBA_1
0.25
p.P35R
ACH-002196
Lung Cancer
CCLE
LSMFSD
LIG_APCC_ABBA_1
0.0556
p.P35R
SBC-1
lung
COSMIC
LSMFSD
LIG_APCC_ABBA_1
0.0556
p.L45P
LS-411N
large_intestine
COSMIC
LSMFSD
LIG_APCC_ABBA_1
0.7582
p.D51N
MOLT-16
haematopoietic_and_lymphoid_tissue
COSMIC
LSMFSD
LIG_APCC_ABBA_1
0.3056
Drug responses associated with HSPB7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSMFSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UBY9
Heat shock protein beta-7
LIG_APCC_ABBA_1
45:50
LSMFSD
APC,CDC20,FZR1
0.6841
More...