DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSMFYE
Uniprot ID:
Q8NI35
Source protein:
InaD-like protein
Source gene:
PATJ
Class:
LIG_APCC_ABBA_1
Location:
35:40
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.789
ASA_SCORE:
54.65
COIL:
0.0198
CONS_SCORE:
0.33
DSS_SCORE:
0.3325
HELIX:
0.9723
FCONS_SCORE:
0.9647
RIG_SCORE:
0.8338
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L46V
SIDM00180
Kidney Carcinoma
GDSC
LSMFYE
LIG_APCC_ABBA_1
0.1667
p.L46V
LB996-RCC
kidney
COSMIC
LSMFYE
LIG_APCC_ABBA_1
0.1667
p.T41A
SIDM00364
B-Lymphoblastic Leukemia
GDSC
LSMFYE
LIG_APCC_ABBA_1
0.3056
p.T41A
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
LSMFYE
LIG_APCC_ABBA_1
0.3056
p.G32R
ASH-3
thyroid
COSMIC
LSMFYE
LIG_APCC_ABBA_1
0.25
p.M46I
SNU-1040
large_intestine
COSMIC
LSMFYE
LIG_APCC_ABBA_1
0.1667
Drug responses associated with PATJ mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSMFYE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NI35
InaD-like protein
LIG_APCC_ABBA_1
35:40
LSMFYE
APC,CDC20,FZR1
0.789
More...