DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSPFRE
Uniprot ID:
Q9C0I3
Source protein:
Serine-rich coiled-coil domain-containing protein 1
Source gene:
CCSER1
Class:
LIG_APCC_ABBA_1
Location:
447:452
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9175
ASA_SCORE:
84.5833
COIL:
0.725
CONS_SCORE:
0.7566
DSS_SCORE:
0.3406
HELIX:
0.229
FCONS_SCORE:
1.202
RIG_SCORE:
0.7371
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R451H
TCGA-B5-A11E
UCEC
TCGA
LSPFRE
LIG_APCC_ABBA_1
0.7133
p.R451H
DO41644
UCEC
ICGC
LSPFRE
LIG_APCC_ABBA_1
0.7133
p.R461Q
TCGA-E6-A1LX
UCEC
TCGA
LSPFRE
LIG_APCC_ABBA_1
0.0833
p.R461Q
TCGA-EO-A3B0
UCEC
TCGA
LSPFRE
LIG_APCC_ABBA_1
0.0833
p.R461Q
DO219773
UCEC
ICGC
LSPFRE
LIG_APCC_ABBA_1
0.0833
p.R461Q
DO41020
UCEC
ICGC
LSPFRE
LIG_APCC_ABBA_1
0.0833
p.R451C
TCGA-EO-A22U
UCEC
TCGA
LSPFRE
LIG_APCC_ABBA_1
0.719
p.R451C
DO43755
UCEC
ICGC
LSPFRE
LIG_APCC_ABBA_1
0.719
p.A440S
DO228985
LICA
ICGC
LSPFRE
LIG_APCC_ABBA_1
0.1389
p.A437T
DO232761
PBCA
ICGC
LSPFRE
LIG_APCC_ABBA_1
0.0556
p.I456V
SIDM00425
Ovarian Carcinoma
GDSC
LSPFRE
LIG_APCC_ABBA_1
0.2222
p.I456V
ACH-000663
Ovarian Cancer
CCLE
LSPFRE
LIG_APCC_ABBA_1
0.2222
p.I456V
OVTOKO
ovary
COSMIC
LSPFRE
LIG_APCC_ABBA_1
0.2222
p.E457D
SIDM01154
T-Lymphoblastic Leukemia
GDSC
LSPFRE
LIG_APCC_ABBA_1
0.1944
p.E457D
ACH-000953
Leukemia
CCLE
LSPFRE
LIG_APCC_ABBA_1
0.1944
p.E457D
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
LSPFRE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with CCSER1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSPFRE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C0I3
Serine-rich coiled-coil domain-containing protein 1
LIG_APCC_ABBA_1
447:452
LSPFRE
APC,CDC20,FZR1
0.9175
More...