DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSPTPSAE
Uniprot ID:
O14639
Source protein:
Actin-binding LIM protein 1
Source gene:
ABLIM1
Class:
DEG_SCF_FBW7_2
Location:
430:437
E3 ligase:
FBXW7
DEGRON score:
0.9979
ASA_SCORE:
68.4875
COIL:
0.8713
CONS_SCORE:
0.4065
DSS_SCORE:
0.7119
HELIX:
0.0579
FCONS_SCORE:
1.1027
RIG_SCORE:
0.6142
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R445W
TCGA-21-1079
LUSC
TCGA
LSPTPSAE
DEG_SCF_FBW7_2
0.1111
p.R445W
TCGA-B5-A11E
UCEC
TCGA
LSPTPSAE
DEG_SCF_FBW7_2
0.1111
p.R445W
DO26846
LUSC
ICGC
LSPTPSAE
DEG_SCF_FBW7_2
0.1111
p.R445W
DO222837
MELA
ICGC
LSPTPSAE
DEG_SCF_FBW7_2
0.1111
p.R445W
DO41644
UCEC
ICGC
LSPTPSAE
DEG_SCF_FBW7_2
0.1111
p.Q440K
TCGA-DA-A1IB
SKCM
TCGA
LSPTPSAE
DEG_SCF_FBW7_2
0.25
p.Q440K
DO38033
SKCM
ICGC
LSPTPSAE
DEG_SCF_FBW7_2
0.25
p.R445Q
TCGA-DC-6158
READ
TCGA
LSPTPSAE
DEG_SCF_FBW7_2
0.1111
p.R445Q
DO37197
READ
ICGC
LSPTPSAE
DEG_SCF_FBW7_2
0.1111
p.M446T
TCGA-EV-5902
KIRP
TCGA
LSPTPSAE
DEG_SCF_FBW7_2
0.0833
p.M446T
DO20875
KIRP
ICGC
LSPTPSAE
DEG_SCF_FBW7_2
0.0833
p.Y439C
TCGA-F7-A624
HNSC
TCGA
LSPTPSAE
DEG_SCF_FBW7_2
0.7222
p.Y439C
DO44440
HNSC
ICGC
LSPTPSAE
DEG_SCF_FBW7_2
0.7222
p.G438W
DO233650
GACA
ICGC
LSPTPSAE
DEG_SCF_FBW7_2
0.3056
p.E425V
DO231992
LICA
ICGC
LSPTPSAE
DEG_SCF_FBW7_2
0.1944
p.G424E
DO229054
LICA
ICGC
LSPTPSAE
DEG_SCF_FBW7_2
0.1667
p.D447E
MKN7
stomach
COSMIC
LSPTPSAE
DEG_SCF_FBW7_2
0.0556
p.T438M
22RV1
prostate
COSMIC
LSPTPSAE
DEG_SCF_FBW7_2
0.3056
p.R427Q
NCI-H82
lung
COSMIC
LSPTPSAE
DEG_SCF_FBW7_2
0.25
p.R440C
FTC-133
thyroid
COSMIC
LSPTPSAE
DEG_SCF_FBW7_2
0.25
Drug responses associated with ABLIM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSPTPSAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14639
Actin-binding LIM protein 1
DEG_SCF_FBW7_2
430:437
LSPTPSAE
FBXW7
0.9979
More...