DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSPYSD
Uniprot ID:
Q9Y2N7
Source protein:
Hypoxia-inducible factor 3-alpha
Source gene:
HIF3A
Class:
LIG_APCC_ABBA_1
Location:
644:649
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9444
ASA_SCORE:
70.9
COIL:
0.865
CONS_SCORE:
0.5085
DSS_SCORE:
0.7439
HELIX:
0.0387
FCONS_SCORE:
1.0079
RIG_SCORE:
0.6434
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P641H
TCGA-43-6143
LUSC
TCGA
LSPYSD
LIG_APCC_ABBA_1
0.25
p.G657S
TCGA-BH-A0C1
BRCA
TCGA
LSPYSD
LIG_APCC_ABBA_1
0.1111
p.P646S
TCGA-EE-A2MD
SKCM
TCGA
LSPYSD
LIG_APCC_ABBA_1
0.6752
p.G656R
TCGA-IQ-7630
HNSC
TCGA
LSPYSD
LIG_APCC_ABBA_1
0.1389
p.L643M
SIDM01088
Endometrial Carcinoma
GDSC
LSPYSD
LIG_APCC_ABBA_1
0.3056
p.L643M
ACH-000965
Endometrial/Uterine Cancer
CCLE
LSPYSD
LIG_APCC_ABBA_1
0.3056
p.L643M
RL95-2
endometrium
COSMIC
LSPYSD
LIG_APCC_ABBA_1
0.3056
p.P641A
SIDM01318
Hepatocellular Carcinoma
GDSC
LSPYSD
LIG_APCC_ABBA_1
0.25
p.P641A
ACH-001318
Liver Cancer
CCLE
LSPYSD
LIG_APCC_ABBA_1
0.25
p.F659S
ACH-000720
Bladder Cancer
CCLE
LSPYSD
LIG_APCC_ABBA_1
0.0556
p.F659S
TCCSUP
urinary_tract
COSMIC
LSPYSD
LIG_APCC_ABBA_1
0.0556
p.F657L
ALL-SIL
haematopoietic_and_lymphoid_tissue
COSMIC
LSPYSD
LIG_APCC_ABBA_1
0.1111
p.L641M
RL95-2
endometrium
COSMIC
LSPYSD
LIG_APCC_ABBA_1
0.25
p.P659R
OAW-28
ovary
COSMIC
LSPYSD
LIG_APCC_ABBA_1
0.0556
p.F659L
ALL-SIL
haematopoietic_and_lymphoid_tissue
COSMIC
LSPYSD
LIG_APCC_ABBA_1
0.0556
p.F657S
TCCSUP
urinary_tract
COSMIC
LSPYSD
LIG_APCC_ABBA_1
0.1111
Drug responses associated with HIF3A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSPYSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y2N7
Hypoxia-inducible factor 3-alpha
LIG_APCC_ABBA_1
644:649
LSPYSD
APC,CDC20,FZR1
0.9444
More...