DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LSQTPGHT
Uniprot ID:
P46013
Source protein:
Proliferation marker protein Ki-67
Source gene:
MKI67
Class:
DEG_SCF_FBW7_1
Location:
2924:2931
E3 ligase:
FBXW7
DEGRON score:
0.7934
ASA_SCORE:
85.625
COIL:
0.8853
CONS_SCORE:
0.3693
DSS_SCORE:
0.6719
HELIX:
0.051
FCONS_SCORE:
0.9834
RIG_SCORE:
0.6146
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T2927A
SIDM00217
Colorectal Carcinoma
GDSC
LSQTPGHT
DEG_SCF_FBW7_1
0.825
p.T2927A
ACH-000999
Colon/Colorectal Cancer
CCLE
LSQTPGHT
DEG_SCF_FBW7_1
0.825
p.T2927A
SNU-1040
large_intestine
COSMIC
LSQTPGHT
DEG_SCF_FBW7_1
0.825
p.Q2926K
SIDM01265
Plasma Cell Myeloma
GDSC
LSQTPGHT
DEG_SCF_FBW7_1
0.5833
p.Q2926K
SIDM00633
Breast Carcinoma
GDSC
LSQTPGHT
DEG_SCF_FBW7_1
0.5833
p.Q2926K
SIDM01099
Neuroblastoma
GDSC
LSQTPGHT
DEG_SCF_FBW7_1
0.5833
p.Q2926K
SIDM00928
Breast Carcinoma
GDSC
LSQTPGHT
DEG_SCF_FBW7_1
0.5833
p.Q2926K
SIDM00052
Esophageal Squamous Cell Carcinoma
GDSC
LSQTPGHT
DEG_SCF_FBW7_1
0.5833
p.Q2926K
SIDM00971
Breast Carcinoma
GDSC
LSQTPGHT
DEG_SCF_FBW7_1
0.5833
p.Q2926K
SIDM00930
Osteosarcoma
GDSC
LSQTPGHT
DEG_SCF_FBW7_1
0.5833
p.Q2926K
SIDM00956
Esophageal Squamous Cell Carcinoma
GDSC
LSQTPGHT
DEG_SCF_FBW7_1
0.5833
p.L2918P
SIDM01588
Endometrial Carcinoma
GDSC
LSQTPGHT
DEG_SCF_FBW7_1
0.1667
p.L2918P
ACH-000993
Endometrial/Uterine Cancer
CCLE
LSQTPGHT
DEG_SCF_FBW7_1
0.1667
p.D2940N
SIDM00794
Other Solid Cancers
GDSC
LSQTPGHT
DEG_SCF_FBW7_1
0.0833
p.D2940N
ACH-000975
Lung Cancer
CCLE
LSQTPGHT
DEG_SCF_FBW7_1
0.0833
p.D2940N
ACH-001442
Skin Cancer
CCLE
LSQTPGHT
DEG_SCF_FBW7_1
0.0833
p.D2940N
A388
skin
COSMIC
LSQTPGHT
DEG_SCF_FBW7_1
0.0833
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Drug responses associated with MKI67 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LSQTPGHT
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46013
Proliferation marker protein Ki-67
DEG_SCF_FBW7_1
2924:2931
LSQTPGHT
FBXW7
0.7934
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