DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
LSRTPAAE
Uniprot ID:
Q15818
Source protein:
Neuronal pentraxin-1
Source gene:
NPTX1
Class:
DEG_SCF_FBW7_2
Location:
121:128
E3 ligase:
FBXW7
DEGRON score:
0.9678
ASA_SCORE:
78.8875
COIL:
0.5928
CONS_SCORE:
0.7994
DSS_SCORE:
0.6353
HELIX:
0.3776
FCONS_SCORE:
0.9895
RIG_SCORE:
0.6989
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S113L
TCGA-BR-7958
STAD
TCGA
LSRTPAAE
DEG_SCF_FBW7_2
0.1111
p.S113L
DO38344
STAD
ICGC
LSRTPAAE
DEG_SCF_FBW7_2
0.1111
p.G112S
TCGA-EE-A3AE
SKCM
TCGA
LSRTPAAE
DEG_SCF_FBW7_2
0.0833
p.G112S
DO37802
SKCM
ICGC
LSRTPAAE
DEG_SCF_FBW7_2
0.0833
p.Q135H
TCGA-UD-AAC4
MESO
TCGA
LSRTPAAE
DEG_SCF_FBW7_2
0.1389
p.G112D
DO220899
MELA
ICGC
LSRTPAAE
DEG_SCF_FBW7_2
0.0833
p.G134R
ACH-001690
Head and Neck Cancer
CCLE
LSRTPAAE
DEG_SCF_FBW7_2
0.1667
p.L121P
ACH-001863
Bile Duct Cancer
CCLE
LSRTPAAE
DEG_SCF_FBW7_2
0.6471
p.Q132E
ACH-002055
Lymphoma
CCLE
LSRTPAAE
DEG_SCF_FBW7_2
0.2222
Drug responses associated with NPTX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSRTPAAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15818
Neuronal pentraxin-1
DEG_SCF_FBW7_2
121:128
LSRTPAAE
FBXW7
0.9678
More...